DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and pax7b

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001139621.1 Gene:pax7b / 566533 ZFINID:ZDB-GENE-080917-54 Length:510 Species:Danio rerio


Alignment Length:568 Identity:163/568 - (28%)
Similarity:224/568 - (39%) Gaps:178/568 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAV 147
            |..|..|.|.|.....||: ...|.|..:.:     :|:::|.:.. |:|...|::.:....|.|
Zfish    26 PLEVSTPLGQGRVNQLGGV-FINGRPLPNHI-----RHKIVEMAHH-GIRPCVISRQLRVSHGCV 83

  Fly   148 SKLL------GSLRPPGLIGGSKPK-----VATPTVVSKIEQYKRENPTIFAWEIRERLISEGVC 201
            ||:|      ||:| ||.||||||:     ||||.|..:||:||||||.:|:||||::|:.:|||
Zfish    84 SKILCRYQETGSIR-PGAIGGSKPRQTQKQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVC 147

  Fly   202 TNATAP-----SVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGV 261
            ..:|.|     |||||:|:||.|..::...:                                  
Zfish   148 DRSTVPSGEASSVSSISRVLRARFGKKDDED---------------------------------- 178

  Fly   262 PPPPPPSALWSVAAPTLANLPPSAASAVPVSTC------GSLSSAHLMAGGAGGTPTNRAISPGS 320
                                           .|      |...:.|.:.|..|            
Zfish   179 -------------------------------DCDKKDDTGEKKTKHSIDGILG------------ 200

  Fly   321 GSHDTLESADENRHID-SDYLDDDDEP---KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERL 381
                     |:.|..: ||...:.|.|   |.||:||||:.||||||||.|:::|||.:.|||.|
Zfish   201 ---------DKGRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREEL 256

  Fly   382 SSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAPASSPTPSNHSSAST 446
            :.||.|:|||||||||||||:||:....|.|       |...|.......|...||...:....:
Zfish   257 AQRTKLTEARVQVWFSNRRARWRKQAGANQL-------AAFNHLLPGGFPPTGMPTLPTYQLPES 314

  Fly   447 SAPVAPVPPPQQPLPLCGD-HSPQGPPPSVLLHPLHGPPGGHHHHHPLHLPTHPAALQLLSHYHQ 510
            |.|...:|.     .:.|. |.||..|||.:            |...|...: .:|..|.|:.|.
Zfish   315 SYPTTTLPQ-----DVSGTVHRPQPLPPSTM------------HQGGLSSDS-SSAYGLSSNRHS 361

  Fly   511 QQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGGERSAFRSLVSSPSAAA--------- 566
            ..........|.....|           .||.:|.||     ....|::|:|||.|         
Zfish   362 FSSYTDTFMSQSASSNH-----------MNPVSNGLS-----PQVMSILSNPSAVAPQPQHEFSI 410

  Fly   567 ---FLGLARQYAVAASLTVAEEQRSRLHYSAGGLGSGGEGTGPNTNTT 611
               ...|.....::||.:    |||....:|..|.|......|..:||
Zfish   411 SPLHSSLEASNPISASCS----QRSEPIKTADSLPSSQSYCPPTYSTT 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 51/112 (46%)
Homeobox 352..404 CDD:278475 36/51 (71%)
pax7bNP_001139621.1 PAX 34..170 CDD:238076 59/143 (41%)
Homeobox 226..279 CDD:278475 36/52 (69%)
Pax7 346..389 CDD:289156 11/59 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.