DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and pax1a

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_068070533.1 Gene:pax1a / 564359 ZFINID:ZDB-GENE-070112-182 Length:359 Species:Danio rerio


Alignment Length:457 Identity:114/457 - (24%)
Similarity:169/457 - (36%) Gaps:144/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FGGGGSTGGI-PHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLL---- 151
            :|.....||: .:|...|....|       |::|.::. |:|..||::.:....|.|||:|    
Zfish    10 YGEVNQLGGVFVNGRPLPNAIRL-------RIVELAQL-GIRPCDISRQLRVSHGCVSKILARYN 66

  Fly   152 --GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINR 214
              ||:. ||.||||||:|.||.||..|..||:.:|.|||||||:||:::|||.....||||||:|
Zfish    67 ETGSIL-PGAIGGSKPRVTTPNVVKNIRDYKQSDPGIFAWEIRDRLLADGVCDKYNVPSVSSISR 130

  Fly   215 ILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLA 279
            ||||:....               ..|:||.:          |.|.    ||.|:|         
Zfish   131 ILRNKIGNL---------------SQPNPYEN----------GKQA----PPQSSL--------- 157

  Fly   280 NLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDD 344
                |.....|.|...::|.:........|.|.       :|.|.::.....:.|..|:.|.   
Zfish   158 ----SYNHIYPYSYPNAMSPSGTKMSSPPGVPV-------TGGHVSISRGWPSAHTVSNILG--- 208

  Fly   345 EPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 409
                  .|....|..:...|     .:.|                 :::.|..| ||.::.|...
Zfish   209 ------IRAFMDPTAIASAE-----GYAP-----------------KMEDWGVN-RATFQSHGVN 244

  Fly   410 NLLKRQRSSPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474
            .:             .:.|.||....|.||  |:.|:..|.....|..|    .|.:|       
Zfish   245 GI-------------DKSSIDADIKYPQPS--STLSSYVPACAYSPSNQ----YGVYS------- 283

  Fly   475 VLLHPLHGPPGGH----HH---------HHPLHLPTHPAAL-QLLSHYHQQQQQQQQQQHQQQQQ 525
                   ||.||:    ||         |....:..||:.: ..::..|..:...::......:|
Zfish   284 -------GPAGGYVSPGHHWQAQGTSLTHPGGGVAMHPSDIHSSMAFKHAVRDGDRKPPSPLSKQ 341

  Fly   526 QH 527
            ||
Zfish   342 QH 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 50/102 (49%)
Homeodomain 349..405 CDD:459649 8/55 (15%)
pax1aXP_068070533.1 PAX 9..136 CDD:238076 59/134 (44%)

Return to query results.
Submit another query.