DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and pax4

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001232009.2 Gene:pax4 / 561564 ZFINID:ZDB-GENE-041210-244 Length:360 Species:Danio rerio


Alignment Length:421 Identity:108/421 - (25%)
Similarity:166/421 - (39%) Gaps:146/421 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTSVQIPPGFGGGGST---GGI-PHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQ 143
            |.|.:|...|.|.||.   ||: .:|...|        :.:.||:......|:|..:|::.:...
Zfish     4 PPSNEISVYFSGEGSVNQLGGVFLNGRPLP--------VYKRRLMIELATEGMRPCEISRILKVS 60

  Fly   144 QGAVSKLLGSLRPPGLI-----GGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTN 203
            .|.|||:||..:..|.|     |||:|::.||.|:|.|.|:||:|||:||||||::|.:|..|..
Zfish    61 NGCVSKILGRFQRTGAIGPKAVGGSRPRLLTPEVISIIVQHKRQNPTLFAWEIRQKLATERACRG 125

  Fly   204 ATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPS 268
            ...||||||||||:....:   .:.|       ||...|      :|                  
Zfish   126 DQVPSVSSINRILKKIHQD---VDIA-------YPNEKH------YH------------------ 156

  Fly   269 ALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENR 333
                                                                         .|:.
Zfish   157 -------------------------------------------------------------TEHL 160

  Fly   334 HIDSDY---LDDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVW 395
            ::.|.:   ::.:......|:||.|:.:|...|||||....||.:.|||:|:..|:||:..::||
Zfish   161 NVQSHFQQQMNTNLRRTAHRSRTAFTADQSGRLEKEFTCGLYPDLLTREKLAEETNLSQDTIKVW 225

  Fly   396 FSNRRAKWRRHQRM-----------------NLLKRQRSSPANPLHSQQSNDAPASSPT------ 437
            ||||||:.||.::.                 |.|....|:....|...:::.||::.|.      
Zfish   226 FSNRRARMRRERKFEHNDCGIARRGFLGNCRNALISLSSTAGCSLDDYRAHHAPSAFPLAAQRDR 290

  Fly   438 ---PSNH--SSASTSAPVAPVPPPQQPLPLC 463
               |..|  |:|.:|   ......:..:|:|
Zfish   291 NTFPLAHLNSNALSS---CSFDQTESLMPMC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 46/101 (46%)
Homeodomain 349..405 CDD:459649 27/55 (49%)
pax4NP_001232009.2 PAX 15..139 CDD:128645 53/131 (40%)
HOX 180..228 CDD:197696 22/47 (47%)

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