DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and gsc

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001016704.1 Gene:gsc / 549458 XenbaseID:XB-GENE-486771 Length:243 Species:Xenopus tropicalis


Alignment Length:181 Identity:55/181 - (30%)
Similarity:75/181 - (41%) Gaps:47/181 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 PPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESAD 330
            ||:..:..|...|  :||.....:|....|:||...|                            
 Frog   103 PPATAYDGAGSVL--MPPVPHQMLPYMNVGTLSRTEL---------------------------- 137

  Fly   331 ENRHIDSDYLDDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVW 395
                   ..|:.....:.||:||.|:.||||.||..|.::.||.|.|||:|:.|..|.|.:|:||
 Frog   138 -------QLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVW 195

  Fly   396 FSNRRAKWRRHQRM------NLLKRQRSSPANPLHSQQSNDAPASSPTPSN 440
            |.||||||||.:|.      |..|..:||.    :|.:..|....|...|:
 Frog   196 FKNRRAKWRRQKRSSSEESENTQKWNKSSK----NSTEKGDEQVKSDLDSD 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 32/55 (58%)
gscNP_001016704.1 Homeodomain 149..205 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

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