DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Pax7

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006239325.1 Gene:Pax7 / 500574 RGDID:1564360 Length:505 Species:Rattus norvegicus


Alignment Length:535 Identity:159/535 - (29%)
Similarity:213/535 - (39%) Gaps:173/535 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AAAAGAGSGAVAGGGGAT---STSPTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLL 123
            ||..||....:..|.|..   :..|..|..|.|.|.....||: ...|.|..:.:     :|:::
  Rat     2 AALPGAVPRMMRPGPGQNYPRTGFPLEVSTPLGQGRVNQLGGV-FINGRPLPNHI-----RHKIV 60

  Fly   124 EFSRFGGLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGSKPK-VATPTVVSKIEQYKR 181
            |.:.. |:|...|::.:....|.|||:|      ||:| ||.||||||: ||||.|..|||:|||
  Rat    61 EMAHH-GIRPCVISRQLRVSHGCVSKILCRYQETGSIR-PGAIGGSKPRQVATPDVEKKIEEYKR 123

  Fly   182 ENPTIFAWEIRERLISEGVCTNATAPS--VSSINRILRNRAAERVATEFARTAAYGLYPPPPHPY 244
            |||.:|:||||:||:.:|.|..:|.||  ||||:|:||.:..::...|                 
  Rat   124 ENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEDDE----------------- 171

  Fly   245 GSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGG 309
                          :|......                            |...:.|.:.|..| 
  Rat   172 --------------EGDKKEED----------------------------GEKKAKHSIDGILG- 193

  Fly   310 TPTNRAISPGSGSHDTLESADENRHID--SDYLDDDDEP---KFRRNRTTFSPEQLEELEKEFDK 369
                                |:...:|  ||...:.|.|   |.||:||||:.||||||||.|::
  Rat   194 --------------------DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFER 238

  Fly   370 SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAPAS 434
            :|||.:.|||.|:.||.|:|||||||||||||:||:....|.|       |...|.......|..
  Rat   239 THYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQL-------AAFNHLLPGGFPPTG 296

  Fly   435 SPTPSNHSSASTSAPVAPVPPPQQP------LPLCGD-----HSPQGPPPSVLLHPLHGPPGGHH 488
            .||               :||.|.|      ..:..|     |.||..|||.:            
  Rat   297 MPT---------------LPPYQLPDSAYPTTTVSQDGGSTVHRPQPLPPSTM------------ 334

  Fly   489 HHHPLHLPTHPAALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAA--NHLS--MG 549
              |...|....||....|.|..:                 ......|.|..||.|  ||::  ..
  Rat   335 --HQGGLAAAAAAADSSSAYGAR-----------------HSFSSYSDSFMNPGAPSNHMNPVSN 380

  Fly   550 GERSAFRSLVSSPSA 564
            |......|::|:|||
  Rat   381 GLSPQVMSILSNPSA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 52/105 (50%)
Homeobox 352..404 CDD:278475 36/51 (71%)
Pax7XP_006239325.1 PAX 34..161 CDD:128645 58/134 (43%)
Homeobox 220..274 CDD:395001 37/53 (70%)
Pax7 <354..385 CDD:403540 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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