DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and pax3

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_012825755.1 Gene:pax3 / 448464 XenbaseID:XB-GENE-482740 Length:486 Species:Xenopus tropicalis


Alignment Length:489 Identity:147/489 - (30%)
Similarity:205/489 - (41%) Gaps:165/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAV 147
            |..|..|.|.|.....||: ...|.|..:.:     :|:::|.:.. |:|...|::.:....|.|
 Frog    27 PLEVSTPLGQGRVNQLGGV-FINGRPLPNHI-----RHKIVEMAHH-GIRPCVISRQLRVSHGCV 84

  Fly   148 SKLL------GSLRPPGLIGGSKPK-VATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNAT 205
            ||:|      ||:| ||.||||||| |.||.|..|||::||:||.:|:||||::|:.:|||...|
 Frog    85 SKILCRYQETGSIR-PGAIGGSKPKQVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNT 148

  Fly   206 APSVSSINRILRNRAAE----------RVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQG 260
            .||||||:||||::..:          :...|..:.|.:.:                      .|
 Frog   149 VPSVSSISRILRSKFGKGDEEDIELDRKEQEESEKRAKHSI----------------------DG 191

  Fly   261 VPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDT 325
            :.....|:                                                ||.|     
 Frog   192 ILRERAPA------------------------------------------------SPES----- 203

  Fly   326 LESADENRHIDSDYLDDDDEP---KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSL 387
                :|...|||    :.|.|   |.||:||||:.|||||||:.|:::|||.:.|||.|:.|..|
 Frog   204 ----EEGSDIDS----EPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 260

  Fly   388 SEARVQVWFSNRRAKWRRHQRMNLLKR----------QRSSPANPLH-----SQQSNDAPASSPT 437
            :|||||||||||||:||:....|.|..          ..:.||.|.:     |.|....|.:...
 Frog   261 TEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPAAMPALPTYQLSETSYQPTSIPQAVSD 325

  Fly   438 PSNHSSASTSAPVAPVPPP---QQPLPLCGDHSPQGPPPSVLLHPLHG---------PPGGHHHH 490
            |||     |.....|:||.   |..||    .:|:......|....||         ||.|..: 
 Frog   326 PSN-----TVHRPQPLPPSSVHQSSLP----SNPESSSAYCLPSGRHGFSSYTDSFVPPSGPSN- 380

  Fly   491 HPLHLPTHPA--------ALQLLSHY----HQQQ 512
                 |.:||        .:.||:::    ||.|
 Frog   381 -----PMNPAIGNGLSPQVMGLLTNHGGVPHQPQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 51/103 (50%)
Homeobox 352..404 CDD:278475 34/51 (67%)
pax3XP_012825755.1 PAX 35..162 CDD:238076 59/134 (44%)
Homeobox 224..278 CDD:365835 35/53 (66%)
Pax7 349..393 CDD:372070 10/49 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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