DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and pax3

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_012825755.1 Gene:pax3 / 448464 XenbaseID:XB-GENE-482740 Length:486 Species:Xenopus tropicalis


Alignment Length:489 Identity:147/489 - (30%)
Similarity:205/489 - (41%) Gaps:165/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAV 147
            |..|..|.|.|.....||: ...|.|..:.:     :|:::|.:.. |:|...|::.:....|.|
 Frog    27 PLEVSTPLGQGRVNQLGGV-FINGRPLPNHI-----RHKIVEMAHH-GIRPCVISRQLRVSHGCV 84

  Fly   148 SKLL------GSLRPPGLIGGSKPK-VATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNAT 205
            ||:|      ||:| ||.||||||| |.||.|..|||::||:||.:|:||||::|:.:|||...|
 Frog    85 SKILCRYQETGSIR-PGAIGGSKPKQVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNT 148

  Fly   206 APSVSSINRILRNRAAE----------RVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQG 260
            .||||||:||||::..:          :...|..:.|.:.:                      .|
 Frog   149 VPSVSSISRILRSKFGKGDEEDIELDRKEQEESEKRAKHSI----------------------DG 191

  Fly   261 VPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDT 325
            :.....|:                                                ||.|     
 Frog   192 ILRERAPA------------------------------------------------SPES----- 203

  Fly   326 LESADENRHIDSDYLDDDDEP---KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSL 387
                :|...|||    :.|.|   |.||:||||:.|||||||:.|:::|||.:.|||.|:.|..|
 Frog   204 ----EEGSDIDS----EPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 260

  Fly   388 SEARVQVWFSNRRAKWRRHQRMNLLKR----------QRSSPANPLH-----SQQSNDAPASSPT 437
            :|||||||||||||:||:....|.|..          ..:.||.|.:     |.|....|.:...
 Frog   261 TEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPAAMPALPTYQLSETSYQPTSIPQAVSD 325

  Fly   438 PSNHSSASTSAPVAPVPPP---QQPLPLCGDHSPQGPPPSVLLHPLHG---------PPGGHHHH 490
            |||     |.....|:||.   |..||    .:|:......|....||         ||.|..: 
 Frog   326 PSN-----TVHRPQPLPPSSVHQSSLP----SNPESSSAYCLPSGRHGFSSYTDSFVPPSGPSN- 380

  Fly   491 HPLHLPTHPA--------ALQLLSHY----HQQQ 512
                 |.:||        .:.||:::    ||.|
 Frog   381 -----PMNPAIGNGLSPQVMGLLTNHGGVPHQPQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 51/103 (50%)
Homeodomain 349..405 CDD:459649 37/55 (67%)
pax3XP_012825755.1 PAX 35..162 CDD:238076 59/134 (44%)
Homeodomain 222..278 CDD:459649 37/55 (67%)
Pax7 349..393 CDD:403540 10/49 (20%)

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