DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and gsb-n

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:569 Identity:147/569 - (25%)
Similarity:212/569 - (37%) Gaps:230/569 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ATSTSPTSVQIP-PGFGGGGSTGGI-PHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHM 140
            |.|..|.....| .|.|.....||: .:|...|....|       :::|.:. .|:|...|::.:
  Fly     6 ANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRL-------KIVEMAA-SGVRPCVISRQL 62

  Fly   141 LTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEG 199
            ....|.|||:|      ||:| ||:||||||||.:|.:.::|::.::|||:||:|||||:||.||
  Fly    63 RVSHGCVSKILNRYQETGSIR-PGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEG 126

  Fly   200 VCTNATAPSVSSINRILR--NRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVP 262
            .   |..||.|||:|:||  :|.:|....::.                      ...:.||:   
  Fly   127 F---ADPPSTSSISRLLRGSDRGSEDGRKDYT----------------------INGILGGR--- 163

  Fly   263 PPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLE 327
                                                                             
  Fly   164 ----------------------------------------------------------------- 163

  Fly   328 SADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTS 386
                    |||..|.:.||      |.||:||||:.||||.||:.|.::.||.|.|||.|:..|:
  Fly   164 --------DSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTA 220

  Fly   387 LSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSN---------------------- 429
            |:|||:|||||||||:.|:|...:      :|..:|::|..||                      
  Fly   221 LTEARIQVWFSNRRARLRKHSGGS------NSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVG 279

  Fly   430 ------DAPASSPT--------------PSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474
                  .||.::.|              ||:|.||:|:|..|            ..|:..|....
  Fly   280 SMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAA------------HHHTQMGGYDL 332

  Fly   475 VLLHPLHGPPGG----------HHHHH-----------------------PLHLPTHPAALQLLS 506
            |.....||.|||          :::|.                       .|||..:.:.|:..|
  Fly   333 VQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPS 397

  Fly   507 HYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGGERSAF 555
            ::      .|...|.......|..|.||:....  ||.|   |...||:
  Fly   398 NW------SQAAYHAAANYNAHVAQHQLNDYAA--AAAH---GNPASAY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 45/102 (44%)
Homeobox 352..404 CDD:278475 32/51 (63%)
gsb-nNP_523862.1 PAX 20..141 CDD:278709 52/132 (39%)
Homeobox 185..238 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450813
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

Return to query results.
Submit another query.