DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Rx

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster


Alignment Length:754 Identity:178/754 - (23%)
Similarity:246/754 - (32%) Gaps:273/754 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 AGSGAVAGGGGAT--STSPTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFG 129
            ||....||.|..|  ..:|.......|||.||      ||.|.|..:..|.|.|.|:::|.::. 
  Fly   250 AGHATHAGHGHPTHHGHAPFGYHNAFGFGQGG------HGYGHPEEAAGNYLNSMHQMVEANQL- 307

  Fly   130 GLRGYDIAQHMLTQQGAVSKLLGSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRER 194
                         |.||     ....||       |....|:.....:|:.    ...|.:.:|:
  Fly   308 -------------QTGA-----NGANPP-------PAPLPPSSFGSHQQHL----AALAAQAQEQ 343

  Fly   195 LISEGVCTNATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQ 259
                                       :...:::|:::..|..|||| |...|.......|...|
  Fly   344 ---------------------------QNQHSKYAKSSPTGAGPPPP-PGAYFMESQTAPVAPSQ 380

  Fly   260 --------------------------GVPPPPPPSALWSVAAPTLA-------NLPPSAASAVPV 291
                                      .|..||.||....:||...:       |.|..|...:|.
  Fly   381 INYDERSMSSASDLEEDDDDAAKLQLDVTSPPTPSPRGQLAAKRKSAGVFCDDNEPKLANGQLPG 445

  Fly   292 STCG----SLSSAHL-----------------------------MAGGAGGTPTNRAISPGSGSH 323
            ...|    |:...|.                             ......|.|...:   .||.|
  Fly   446 GNYGIRPRSMEEVHHQQQSHHHQQQQQQQQQQQQLQQQQGFQHDFRNSGNGNPNGNS---NSGDH 507

  Fly   324 --------DTL--------------ESADENRHIDS---DYLDDDD--EPKFRRNRTTFSPEQLE 361
                    |:|              .|:::...|.|   |...||:  :.|.|||||||:..||.
  Fly   508 GERLNADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLH 572

  Fly   362 ELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLK------------- 413
            |||:.|:|||||.|.:||.|:.:.:|.|.||||||.||||||||.::...|:             
  Fly   573 ELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRL 637

  Fly   414 --RQRSSPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPP--------PQQPLPLCG-DHS 467
              .....|.:|..|     .|..|..|...|...|..|....||        ....|...| .|:
  Fly   638 GCGASGLPVDPWLS-----PPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHA 697

  Fly   468 PQGPPPSVLLH------------PLHGPPGGHHHHH--PL-HLPTH-----PAALQLLSHYHQQQ 512
            ..||||..:.|            |.||.|..|..||  || ||..|     |.|..|.|.:|   
  Fly   698 HNGPPPPHVGHGGHGQPQPPPPPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHH--- 759

  Fly   513 QQQQQQQHQQQQQQHHQQQQQLSPSGCNPAAN--HLSMGGERSAFRSLVSSPSAAAFLGLARQYA 575
                                     |..|...  |.|:....:|....|||..::         :
  Fly   760 -------------------------GVTPLGTPLHSSLPPSSTATTVAVSSSQSS---------S 790

  Fly   576 VAASLTVA--EEQRSRLHYSAGGLGSGGEGTGPNTNTTQSGGSTMTVDNSSSD------SDEEIN 632
            .:|||..:  :...|..:.|.|...|.|:|.  :.::....|||.:...||.|      :.|.::
  Fly   791 SSASLECSGPDVCMSPQNLSIGNADSNGDGR--DLSSDLDAGSTSSNPGSSLDKCAASANIELLD 853

  Fly   633 VHDDS-------DGEIESSAATAAKVARLSSSDAPATLQ 664
            |..||       .|:..|:..|..:      |::.|||:
  Fly   854 VGRDSPPPPPTPTGKGSSTPPTDMR------SNSIATLR 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 12/96 (13%)
Homeodomain 349..405 CDD:459649 36/55 (65%)
RxNP_726006.3 Homeodomain 560..616 CDD:459649 36/55 (65%)
OAR 876..892 CDD:461067 4/17 (24%)

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