DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and prd

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:585 Identity:167/585 - (28%)
Similarity:244/585 - (41%) Gaps:189/585 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFA 188
            |:|...|::.:....|.|||:|      ||:| ||:||||||::|||.:.::||:|||.:|.:|:
  Fly    59 GIRPCVISRQLRVSHGCVSKILNRYQETGSIR-PGVIGGSKPRIATPEIENRIEEYKRSSPGMFS 122

  Fly   189 WEIRERLISEGVCTNATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAG 253
            |||||:||.||||..:||||||:|:|::|.|.|                 |..:...|.:..|||
  Fly   123 WEIREKLIREGVCDRSTAPSVSAISRLVRGRDA-----------------PLDNDMSSASGSPAG 170

  Fly   254 NVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISP 318
            :                            .:.||    |:|||                    ..
  Fly   171 D----------------------------GTKAS----SSCGS--------------------DV 183

  Fly   319 GSGSHDTLESADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVST 377
            ..|.|:..:.:||      |..|.:.||      |.||.|||||..||:|||:.|:::.||.:.|
  Fly   184 SGGHHNNGKPSDE------DISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYT 242

  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAP---------- 432
            ||.|:.||:|:|||:|||||||||:.|:.                 |:..|..||          
  Fly   243 REELAQRTNLTEARIQVWFSNRRARLRKQ-----------------HTSVSGGAPGGAAASVSHV 290

  Fly   433 -ASSPTPSNHSSASTSAPVAPVPPP-------QQPLPLCGDH-----SPQGPPPSVLLHP--LHG 482
             |||..||..||..:.||:|.:|..       ||.....|.|     |...|..|..|.|  ...
  Fly   291 AASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTT 355

  Fly   483 PPGGHHHHHPLHLP---------------THPAALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQ 532
            ||    |||..:.|               |.|....::|.|    :.|....:..:.:.|....:
  Fly   356 PP----HHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSY----ETQLGSVYGTETETHQTMPR 412

  Fly   533 QLSPSGCNPAANHLSMGGERSAFRSLVSSPSAAAFLGLARQYAVAASLTVAEEQRSRLHYSAGGL 597
            ..||   |.:.:        |||..|..:|::.:        ||.:              .||..
  Fly   413 NESP---NESVS--------SAFGQLPPTPNSLS--------AVVS--------------GAGVT 444

  Fly   598 GSGGEGTGPNTNTTQSGGSTMTVDNSSSDSDEEINVHDDSDGEIE---SSAATAAKVARLSSSDA 659
            .|.|..:|.:.:.:.:..|..:.:.|::...|.:::...|..::.   ||.......|.||..|:
  Fly   445 SSSGANSGADPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDS 509

  Fly   660  659
              Fly   510  509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 48/92 (52%)
Homeobox 352..404 CDD:278475 32/51 (63%)
prdNP_723721.1 PAX 27..154 CDD:238076 49/95 (52%)
Homeobox 217..269 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450814
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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