DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and Gsc

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster


Alignment Length:486 Identity:127/486 - (26%)
Similarity:182/486 - (37%) Gaps:107/486 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GGGGATSTSP-TSVQIPPGFG---------GGGSTGGIPHGAGG-----------PTGSTLNTLM 117
            ||||.|:|:| |:..|||...         ...|....|..||.           |.|.||....
  Fly    11 GGGGTTTTTPSTTPDIPPSKAKFKITVVSTPSPSPPPTPPPAGSMLAQMVETNSPPAGYTLKRSP 75

  Fly   118 S-----QHRLLEFSRF-GGLRGYDIAQHML--TQQ-GAVSKLLGSLRPPGLIGGSKPKVATPTV- 172
            |     |....:.||. |....|.:...||  :|| |.:.:.|.|:.........:.:..||:. 
  Fly    76 SDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQTPSSD 140

  Fly   173 ------VSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSS---------------INRIL 216
                  |:.:|:.:|......:....:.::........||||..|               |:..|
  Fly   141 DGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGL 205

  Fly   217 RNRAAERVATEFARTAAYGLYPP------P---PHPYGSFTWHPAGNVPGGQGVPPPPPPSALWS 272
            :...||..|:..:.:::.....|      |   .|| |....|.|.....|....|..     :.
  Fly   206 KRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHP-GLHLGHLAAAAASGFAASPSD-----FL 264

  Fly   273 VAAPTLANLPPSAASAVPVS-TCGSLSSAHLMAGGAGGT--------PTNRAISPGSGSHDTLES 328
            ||.|   |..|:...|..|: ...:...||:....||.:        |......|..|:|.    
  Fly   265 VAYP---NFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHH---- 322

  Fly   329 ADENRHIDSDYLDDDDEPK-FRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARV 392
             ....|:  .:|.....|| .||:||.|:.||||:||..|||:|||.|..||:|:.:..|.|.||
  Fly   323 -HGQHHL--SHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV 384

  Fly   393 QVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPPPQ 457
            :|||.|||||||:.      ||:.......|..:|.......:...|:.:::||......|..|.
  Fly   385 EVWFKNRRAKWRKQ------KREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPG 443

  Fly   458 QPLPLCGDH-SPQGPPPSVLLHPLHGPPGGH 487
                  .|| |.|      |:| :...|.|:
  Fly   444 ------SDHYSAQ------LVH-IKSDPNGY 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 22/122 (18%)
Homeodomain 349..405 CDD:459649 34/55 (62%)
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 34/55 (62%)

Return to query results.
Submit another query.