DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Vsx1

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001284898.1 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:899 Identity:211/899 - (23%)
Similarity:298/899 - (33%) Gaps:353/899 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PTLNRDLGSLTVANSGLSAAHWKMEPHPQR--------------------ITSLAPHASSVAAAS 49
            ||.|      |.||..|||...:.:...|:                    ..|::|..|.::||:
  Fly    44 PTAN------TPANGSLSAVQQQQQQQQQQQQQQQQLQQQQQQAIDSLRESRSISPDVSRLSAAA 102

  Fly    50 VAAAAAA--------------AAAAAAAAAGAGSGAVAGGGGATSTSPTSVQ---IPPGFGGGGS 97
            .||||||              |||..||||..|:.|.|.....|:.:..:..   :||||    |
  Fly   103 AAAAAAAAHCQLPVFNPANFYAAAGYAAAADPGNAAAAHHHHMTTLAAAAYLRGFLPPGF----S 163

  Fly    98 TGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQG---AVSKLLGSLRPPGL 159
            |   ||...|.        ..||...:|:.....||.:.|..:....|   :.||...|....|.
  Fly   164 T---PHEFRGH--------FQQHFGAQFAEQAAARGQEYASSLANASGDEQSPSKNSSSSGNGGS 217

  Fly   160 ------IGGSKP------KVATPTVVSKIEQYKRENPTIFAWEIRERLISE-------GVCTNAT 205
                  .||..|      .:.:||.                        |.       ||..:..
  Fly   218 GGSGSGSGGGNPTSNGLGHLGSPTA------------------------SNGGSGGGAGVGGSGG 258

  Fly   206 APSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSAL 270
            ....|..|               :.|:..|         |:      |...|.:..|..|..||.
  Fly   259 GSGTSGSN---------------SSTSGNG---------GN------GGSSGSRSSPAGPHHSAA 293

  Fly   271 -----WSVAAPTLANLPPSAASA------------------VPVSTCGSLSSAHL---------- 302
                 .:.||...|:...:||:|                  |......:..:||.          
  Fly   294 LAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAHAAHAHAHHAEAFLG 358

  Fly   303 MAGGAGGTPTNR--------AISPGSGSHDTLESADENRHIDSDYLDDDDEPKFRRNRTTFSPEQ 359
            .||||||.|.:.        .:.|| |:....:..::.||                .||.|:..|
  Fly   359 AAGGAGGNPNSLLAAHGGDVLVGPG-GTGPGGKKKNKRRH----------------GRTIFTSSQ 406

  Fly   360 LEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM--------------- 409
            ||||||.|.::|||.||.||.||.:|.|:|.|:|||:.|||||||:.::.               
  Fly   407 LEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGA 471

  Fly   410 ----------NLLK----------------RQRSSPANPLHSQQSN-DAPASSPTPSNHSSAST- 446
                      .::|                ::....|..|.|.:|: :.|.|..|.:::|:.|| 
  Fly   472 MVRHSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGSTH 536

  Fly   447 SAPVAPVPPPQQPLPLCGDHSPQGPPPSVLLHPLHGPPG--GHHHHHPLHLPTHPA--------- 500
            ::|::.....:    |..|    .|||:.      |..|  ||||||..|...|.|         
  Fly   537 NSPISSFSISR----LLFD----APPPAA------GSAGGKGHHHHHHHHKGHHHAHVHAQAQAH 587

  Fly   501 ALQLLSHYHQQQQQQQQQQH--------------------------------------------- 520
            |..||.|..|||||||||||                                             
  Fly   588 AHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYN 652

  Fly   521 --------------QQQQQQHHQQQQQLSPSGCNPAANHL----SMGGERSAFRSLVSSPSAAAF 567
                          ||||||..|||||......:.:.:|:    :..|...|..:..::.:|.|.
  Fly   653 QQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQHHHSVHHMHHHNAAAGYAEAAVAAAAAAAAVAA 717

  Fly   568 LGLARQYAVA-----------ASLTVAEEQRSRLHYSAGGL--------GSGGEGTGPNTNTTQS 613
            ...||..|.|           |::|:||.:..........:        ....|....:|||...
  Fly   718 AANARNAAAAAAVAAASASASAAVTIAESEAEEEQDDIEDMELDKDCEVEEDVEPVDNDTNTNNE 782

  Fly   614 GGSTMTVD-------NSSSDSDEEINVHDDSDGEIESSAATAAKV----ARLSS 656
            ..:....|       ::.:|:|.||::.||.|.|:........||    |.|.|
  Fly   783 HDNECDADADVEADVDADADADPEIDICDDHDEEMRLQEQLLLKVKQEQAHLGS 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 20/118 (17%)
Homeobox 352..404 CDD:278475 32/51 (63%)
Vsx1NP_001284898.1 Homeobox 399..451 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450809
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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