DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and Dmbx1

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001101431.1 Gene:Dmbx1 / 313512 RGDID:1308265 Length:376 Species:Rattus norvegicus


Alignment Length:334 Identity:94/334 - (28%)
Similarity:131/334 - (39%) Gaps:113/334 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNL 411
            |.||:||.|:.:|||.|||.|.|:|||.|..||||:..|:|.||||||||.|||||:|:.|| :|
  Rat    65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR-SL 128

  Fly   412 LKR--QRSSPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474
            .|.  |:...|...|.:...:.|||:....                .:||..|     |.|.|  
  Rat   129 QKEQLQKQKEAEGSHGEGKMETPASNTQLE----------------AEQPPSL-----PSGDP-- 170

  Fly   475 VLLHPLHGPPGGHHHHHPLHLPTHPAALQL-LSHYHQQQQQQQQQQHQQQQQQHHQQQQQLSPS- 537
                                    ||.||| ||.....:...:.|..:::..:..:.:.:.||. 
  Rat   171 ------------------------PAELQLSLSEQSASESAPEDQLDREEDSRAEEPKAEKSPGS 211

  Fly   538 -----GCNPAANHLSMGGERSAFRSLVSSPSAAA--FLGLARQYAVA-ASLTVAEEQ-------- 586
                 ||..|:......|      ||..:|:|.|  .||.:..|:.: .||...:||        
  Rat   212 ESKVLGCKRASPKADSPG------SLAITPAAPAGSLLGPSHSYSSSPLSLFRLQEQFRQHMAAT 270

  Fly   587 RSRLHYSAGGLGSGGEGTGPNTNTTQSGGSTMTVDNSSSDSDEEINVHDDSDGEIESSAATAAKV 651
            .:.:|||:..:|    |..|                                   .::||.||.|
  Rat   271 NNLVHYSSFEVG----GPAP-----------------------------------AAAAAAAAAV 296

  Fly   652 ARLSSSDAP 660
            ..|..:.||
  Rat   297 PYLGVNMAP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 36/55 (65%)
Dmbx1NP_001101431.1 Homeodomain 67..123 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.