DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Alx4

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001100023.1 Gene:Alx4 / 296511 RGDID:1310201 Length:399 Species:Rattus norvegicus


Alignment Length:405 Identity:108/405 - (26%)
Similarity:149/405 - (36%) Gaps:145/405 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 ARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVST 293
            ||.:.....|.||.|.                 |||.||:             ||          
  Rat    83 ARGSFNKFQPQPPTPQ-----------------PPPAPPA-------------PP---------- 107

  Fly   294 CGSLSSAHL-MAGGAGGTPTNRA--ISPGSGSHDT-----------------LESADENRHIDSD 338
                  ||| :..||..||.:.:  :..|||.|:.                 |....|...:|:.
  Rat   108 ------AHLYLQRGACKTPPDGSLKLQEGSGGHNAALQVPCYAKESNLGEPELPPDSEPVGMDNS 166

  Fly   339 YL--------------------------DDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCVST 377
            ||                          .:..:.|.|||||||:..|||||||.|.|:|||.|..
  Rat   167 YLSVKETGAKGPQDRAGAEIPSPLEKTDSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA 231

  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPAN----PLHSQQSNDAPASSPTP 438
            ||:|:.||.|:||||||||.|||||||:.:|...:::.|:..:.    ||.::..|.|...:|:.
  Rat   232 REQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSW 296

  Fly   439 SNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPP----SVLLHPLHGPPGGHHHHHPLHLPTHP 499
            ..::.|::..|...|  |..|:|.|  .||...||    |.:...|.....|.|...     ||.
  Rat   297 IGNNGAASPVPACVV--PCDPVPAC--MSPHAHPPGSGASSVSDFLSVSGAGSHVGQ-----THM 352

  Fly   500 AALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGGERSAFRSLVSSPSA 564
            .:|                               ...:|.:|..|...|.||...     .:.|.
  Rat   353 GSL-------------------------------FGAAGISPGLNGYEMNGEPDR-----KTSSI 381

  Fly   565 AAFLGLARQYAVAAS 579
            ||....|::::.|.|
  Rat   382 AALRMKAKEHSAAIS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 40/55 (73%)
Alx4NP_001100023.1 Homeodomain 203..259 CDD:459649 40/55 (73%)
OAR 375..393 CDD:461067 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.

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