DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and Pax2

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006231505.2 Gene:Pax2 / 293992 RGDID:1305568 Length:432 Species:Rattus norvegicus


Alignment Length:461 Identity:140/461 - (30%)
Similarity:199/461 - (43%) Gaps:131/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLL--- 151
            ||.||....||:     ...|..|..::.| |::|.:. .|:|..||::.:....|.|||:|   
  Rat    15 PGHGGVNQLGGV-----FVNGRPLPDVVRQ-RIVELAH-QGVRPCDISRQLRVSHGCVSKILGRY 72

  Fly   152 ---GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSIN 213
               ||:: ||:|||||||||||.||.||.:|||:|||:||||||:||::||:|.|.|.|||||||
  Rat    73 YETGSIK-PGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSIN 136

  Fly   214 RILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTL 278
            ||:|.:..:                 |.||           .|.|.|.....|...:    .|:.
  Rat   137 RIIRTKVQQ-----------------PFHP-----------TPDGAGTGVTAPGHTI----VPST 169

  Fly   279 ANLPPSAASAVPVSTCGSLS-------------------------SAHLMAGGAGGTP---TNRA 315
            |:.|.|:||..||   ||.|                         .||:.  |.||..   |.|.
  Rat   170 ASPPVSSASNDPV---GSYSINGILGIPRSNGEKRKREEVEVYTDPAHIR--GGGGLHLVWTLRD 229

  Fly   316 ISPGSGSHDTLESADEN--RHIDSDYLDDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCV-ST 377
            :|.||..:...:|..::  :|:.:|               ||:.:|||.|::.|::..||.| ..
  Rat   230 VSEGSVPNGDSQSGVDSLRKHLRAD---------------TFTQQQLEALDRVFERPSYPDVFQA 279

  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANP-LHSQQSNDAPASSPTPSNH 441
            .|.:.|..           .|..:.......::.:|...|:..|| |.|..|  ...:.|..:..
  Rat   280 SEHIKSEQ-----------GNEYSLPALTPGLDEVKSSLSASTNPELGSNVS--GTQTYPVVTGR 331

  Fly   442 SSASTSAPVAP--VPPPQQPLPLCGDHSPQGPPPSVLLHPLHGPP-GGHHHHHPLHLP------- 496
            ..|||:.|..|  |||..|     |.:     |.|.|...:.|.. .|:.:.||.:..       
  Rat   332 DMASTTLPGYPPHVPPTGQ-----GSY-----PTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRF 386

  Fly   497 THPAAL 502
            ::||.|
  Rat   387 SNPALL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 58/102 (57%)
Homeobox 352..404 CDD:278475 13/52 (25%)
Pax2XP_006231505.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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