DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and pax-2

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_500513.1 Gene:pax-2 / 187062 WormBaseID:WBGene00003938 Length:351 Species:Caenorhabditis elegans


Alignment Length:295 Identity:94/295 - (31%)
Similarity:124/295 - (42%) Gaps:86/295 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PGFGGGGSTGGIPHGA----GGPTGSTLNTL---MSQHRLLEFSRFGGLRGYDIAQHMLTQQGAV 147
            |....|..||....|.    |.|...|:...   ||||         |.|..||::.:....|.|
 Worm    85 PLLSDGSHTGVNQLGGVFVNGRPLPDTIRAQIVEMSQH---------GTRPCDISRQLKVSHGCV 140

  Fly   148 SKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATA 206
            ||:|      ||:| ||:|||||||||||.||..|..|||.|||:||||||::||.:.:|.....
 Worm   141 SKILGRYYSTGSVR-PGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLIEDQICGEENV 204

  Fly   207 PSVSSINRILRNRA-AERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSAL 270
            |||||||||:||:: ..::||..:.|.:..              .|:......|..||......:
 Worm   205 PSVSSINRIVRNKSFMAQLATPTSVTPSVA--------------RPSSATSQNQRSPPRGVQQHM 255

  Fly   271 WS------------VAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSH 323
            ..            .:|.|:.:|....|.|:|.:|       |.:.|..|..|           |
 Worm   256 QQSTSVQQLQQFQLTSAATVNSLISRPAFAIPGTT-------HSINGLLGTFP-----------H 302

  Fly   324 DTLESADENRHIDSDYLDDDDEPKFRRNRTTFSPE 358
            .:|             |||    || .|.:|.|.:
 Worm   303 SSL-------------LDD----KF-TNLSTHSAD 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 53/102 (52%)
Homeobox 352..404 CDD:278475 2/7 (29%)
pax-2NP_500513.1 PAX 91..215 CDD:128645 62/133 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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