DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Pax6

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001231127.1 Gene:Pax6 / 18508 MGIID:97490 Length:436 Species:Mus musculus


Alignment Length:480 Identity:154/480 - (32%)
Similarity:206/480 - (42%) Gaps:159/480 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SQHRLLEFSRFGGLRGYDIAQHMLT--------------QQGAVSKLL------GSLRPPGLIGG 162
            ::.:::|.:. .|.|..||::.:.|              ..|.|||:|      ||:||.. |||
Mouse    25 TRQKIVELAH-SGARPCDISRILQTHADAKVQVLDNENVSNGCVSKILGRYYETGSIRPRA-IGG 87

  Fly   163 SKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAE----- 222
            |||:||||.|||||.|||||.|:|||||||:||:|||||||...||||||||:|||.|:|     
Mouse    88 SKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMG 152

  Fly   223 ------RVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANL 281
                  ::.....:|.::|..|         .|:|..:|||                 .||....
Mouse   153 ADGMYDKLRMLNGQTGSWGTRP---------GWYPGTSVPG-----------------QPTQDGC 191

  Fly   282 PPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEP 346
            ....                     .||..||...|.|                     :|.||.
Mouse   192 QQQE---------------------GGGENTNSISSNG---------------------EDSDEA 214

  Fly   347 --------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKW 403
                    |.:||||:|:.||:|.|||||:::|||.|..||||:::..|.|||:|||||||||||
Mouse   215 QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKW 279

  Fly   404 RRHQRMNLLKRQRSSPANPLHSQQSNDAPASSPTPSN---HSSASTSAPVAPVPPPQQPL----- 460
            ||.:::...:||.|:                  |||:   .||.|||. ..|:|.|..|:     
Mouse   280 RREEKLRNQRRQASN------------------TPSHIPISSSFSTSV-YQPIPQPTTPVSSFTS 325

  Fly   461 ---------PLCGDHSPQGPPPSVLLH---PLHGPPGGHHHHHPLHLPTHPAALQLLSHYHQQQQ 513
                     .|...:|...|.||..:.   |:..|.......:...|||.|:.           .
Mouse   326 GSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSV-----------N 379

  Fly   514 QQQQQQHQQQQQQHHQQQQQLSPSG 538
            .:....:.....|.|...|.:..||
Mouse   380 GRSYDTYTPPHMQTHMNSQPMGTSG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 60/116 (52%)
Homeobox 352..404 CDD:278475 33/51 (65%)
Pax6NP_001231127.1 PAX 4..142 CDD:128645 60/118 (51%)
Homeobox 228..281 CDD:395001 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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