DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and Pax2

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001355672.1 Gene:Pax2 / 18504 MGIID:97486 Length:432 Species:Mus musculus


Alignment Length:461 Identity:140/461 - (30%)
Similarity:199/461 - (43%) Gaps:131/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLL--- 151
            ||.||....||:     ...|..|..::.| |::|.:. .|:|..||::.:....|.|||:|   
Mouse    15 PGHGGVNQLGGV-----FVNGRPLPDVVRQ-RIVELAH-QGVRPCDISRQLRVSHGCVSKILGRY 72

  Fly   152 ---GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSIN 213
               ||:: ||:|||||||||||.||.||.:|||:|||:||||||:||::||:|.|.|.|||||||
Mouse    73 YETGSIK-PGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSIN 136

  Fly   214 RILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTL 278
            ||:|.:..:                 |.||           .|.|.|.....|...:    .|:.
Mouse   137 RIIRTKVQQ-----------------PFHP-----------TPDGAGTGVTAPGHTI----VPST 169

  Fly   279 ANLPPSAASAVPVSTCGSLS-------------------------SAHLMAGGAGGTP---TNRA 315
            |:.|.|:||..||   ||.|                         .||:.  |.||..   |.|.
Mouse   170 ASPPVSSASNDPV---GSYSINGILGIPRSNGEKRKREEVEVYTDPAHIR--GGGGLHLVWTLRD 229

  Fly   316 ISPGSGSHDTLESADEN--RHIDSDYLDDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCV-ST 377
            :|.||..:...:|..::  :|:.:|               ||:.:|||.|::.|::..||.| ..
Mouse   230 VSEGSVPNGDSQSGVDSLRKHLRAD---------------TFTQQQLEALDRVFERPSYPDVFQA 279

  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANP-LHSQQSNDAPASSPTPSNH 441
            .|.:.|..           .|..:.......::.:|...|:.||| |.|..|  ...:.|..:..
Mouse   280 SEHIKSEQ-----------GNEYSLPALTPGLDEVKSSLSASANPELGSNVS--GTQTYPVVTGR 331

  Fly   442 SSASTSAPVAP--VPPPQQPLPLCGDHSPQGPPPSVLLHPLHGPP-GGHHHHHPLHLP------- 496
            ...||:.|..|  |||..|     |.:     |.|.|...:.|.. .|:.:.||.:..       
Mouse   332 DMTSTTLPGYPPHVPPTGQ-----GSY-----PTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRF 386

  Fly   497 THPAAL 502
            ::||.|
Mouse   387 SNPALL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 58/102 (57%)
Homeobox 352..404 CDD:278475 13/52 (25%)
Pax2NP_001355672.1 PAX 16..140 CDD:128645 66/131 (50%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 17/62 (27%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 33/47 (70%)
homeodomain 255..>278 CDD:381795 10/22 (45%)
Pax2_C 305..>390 CDD:372091 24/96 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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