DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and pax-3

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_496189.2 Gene:pax-3 / 185022 WormBaseID:WBGene00003939 Length:308 Species:Caenorhabditis elegans


Alignment Length:373 Identity:99/373 - (26%)
Similarity:146/373 - (39%) Gaps:125/373 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 QHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGS-KPKVATPTVVSKI 176
            :|.::..:: .|::...|::.:....|||||:|      ||: .||.|||| :.::....|..:|
 Worm    35 RHAIISMAK-KGIKPCHISRQLKVSHGAVSKILNRYAETGSI-SPGQIGGSPRARLTVQAVEKEI 97

  Fly   177 EQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPP 241
            .....|||.:.|.|:|:.||.:.:||...||:|.:|.|::.|:                      
 Worm    98 LIACDENPQMSAAELRDWLIHKDICTKGNAPTVPAIKRLIGNK---------------------- 140

  Fly   242 HPYGSFTWHPAGNVPGGQGVPPPPPPSAL-WSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAG 305
                            |.|||.......| :|:          .:...:.:..|...||    ..
 Worm   141 ----------------GVGVPKKMERKRLSYSI----------DSILGISIDECSKSSS----DD 175

  Fly   306 GAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFRRNRTTFSPEQLEELEKEFDKS 370
            ..|.:|:|.|.|                               |||||:|:.|||:.||..|...
 Worm   176 EEGSSPSNDASS-------------------------------RRNRTSFTAEQLDVLENAFRAD 209

  Fly   371 HYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQS----NDA 431
            .||..:.||.:|..|.|||.::..|||||||:.|::.              |::.|.:    ..:
 Worm   210 TYPHANARESISKETGLSEEKIMTWFSNRRARCRKNM--------------PMYQQYNVQGFGSS 260

  Fly   432 PASSPT--PSNH---SSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474
            |.|.||  ||..   .|.|||        ||.. ||...|..|..|||
 Worm   261 PPSYPTLLPSPMMFLPSYSTS--------PQLN-PLFFQHILQSSPPS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 34/103 (33%)
Homeobox 352..404 CDD:278475 25/51 (49%)
pax-3NP_496189.2 PAX 13..141 CDD:238076 35/145 (24%)
HOX 187..243 CDD:197696 29/86 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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