DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and Prrx2

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001402085.1 Gene:Prrx2 / 113931 RGDID:1311471 Length:248 Species:Rattus norvegicus


Alignment Length:303 Identity:90/303 - (29%)
Similarity:129/303 - (42%) Gaps:88/303 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 AAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPP----SALWSVAAPTLANLPPSAASAVPVS 292
            ||:.|.||.|.|                  .|||.|    .|..:.:...|.:|...||:.  ..
  Rat     6 AAFALDPPAPGP------------------GPPPAPGDCAQARKNFSVSHLLDLEEVAAAG--RR 50

  Fly   293 TCGSLSSAHLMAGGA----GGTPTNRAI-------SPGSGSHDTLESADENRHIDSDYLDDDDEP 346
            ..|.:.......|.|    ||:..:.|.       |||.|      ||.:.:            .
  Rat    51 AAGPVPGPEAREGAAREPSGGSSGSEAAPQDGDCPSPGHG------SATKRK------------K 97

  Fly   347 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNL 411
            |.|||||||:..||:.||:.|:::|||....||.|:.|.:||||||||||.|||||:||::|..|
  Rat    98 KQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAML 162

  Fly   412 LKRQRSSPANPLHSQQSNDAPASSPTPS----NHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPP 472
            ..|..|...:  :.|::......:|.|:    ::.|...|:|.:.|||          :||.|..
  Rat   163 ATRSASLLKS--YGQEAAIEQPVAPRPTTLSPDYLSWPASSPYSSVPP----------YSPGGSS 215

  Fly   473 PSVLLHPLHGPPGGHHHHHPLHLPTHPAALQL----LSHYHQQ 511
            |:.        ||       :::....|:|:|    .|.:|.|
  Rat   216 PAT--------PG-------VNMANSIASLRLKAKEFSLHHSQ 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 34/55 (62%)
Prrx2NP_001402085.1 Homeodomain 104..156 CDD:459649 30/51 (59%)
COG5576 <110..214 CDD:227863 44/115 (38%)
OAR 222..238 CDD:461067 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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