DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and nobox

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_031761569.1 Gene:nobox / 100494031 XenbaseID:XB-GENE-22068768 Length:652 Species:Xenopus tropicalis


Alignment Length:628 Identity:141/628 - (22%)
Similarity:197/628 - (31%) Gaps:214/628 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AAAGAGSGAVAGG---------------------GGATSTSPTSVQIPPGFGGGGSTGGIPHGAG 106
            :|..:|:|.||.|                     ..|.|:|.....|.|......||.|..:|..
 Frog     6 SATVSGNGFVATGNALRVGSDPLPDSDGSLQSLVSSADSSSTLIAPIRPCRSRLTSTCGAANGPA 70

  Fly   107 GPTGST----LNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLLGSLR--PPGLIGGSKP 165
            |..|.|    ....:...|..|             .....|.|:..:...|||  .|...||.:.
 Frog    71 GNRGETGPAQAEKWIRNRRQRE-------------DEKRCQLGSPDEEETSLRCLEPEAGGGPQD 122

  Fly   166 KVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTN---ATAPSVSSINRILRNRAAERVATE 227
                                    |.|..||:||  .|   |:.|....||. ....|:|....:
 Frog   123 ------------------------EYRAVLINEG--GNGLVASDPREFGINP-SGGCASEGGQCQ 160

  Fly   228 FARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVS 292
            .:..|..|   |.|...|......:|:.|.|.|.  .||......|......|.|.||  .:|..
 Frog   161 LSLLAVCG---PLPEATGGCYSAFSGDDPQGPGY--FPPRGQFQPVNLKVEGNFPQSA--PLPRR 218

  Fly   293 TCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENR-HIDSDYLDDDDEPKFRRNRTTFS 356
            :....:|..|        ||        ..:||....|..| ...:|..::...|..:::||.:|
 Frog   219 SARCAASCRL--------PT--------FIYDTGHGGDRQRGKCPADAPEEPGPPCRKKSRTLYS 267

  Fly   357 PEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPAN 421
            .:||:|||:.|.:.|||....|..::....::..|:.|||.|||||||:.::.::     ..|..
 Frog   268 MDQLQELERLFAEDHYPDSEKRREIAEIIGVTPQRIMVWFQNRRAKWRKVEKTSI-----KGPRK 327

  Fly   422 PL-----------------------------------HSQQSNDAPA------------------ 433
            ||                                   |:..|...|.                  
 Frog   328 PLSAAGMSRPETAVLTVSSSVALSRPEAVSLSVTSGFHTYGSAFPPVGGVRNGFSMVPGSALPTS 392

  Fly   434 -SSPTPSNHSSASTSA-------------------PVAPVPPPQQ-----------------PLP 461
             ||...|.||::.:|:                   |..|.|||.:                 ||.
 Frog   393 QSSDGSSQHSASCSSSSSGLGSPSEVCLPPSQEYPPTFPSPPPLRRVGLPMSMAFNPSSHMVPLM 457

  Fly   462 LCGDHSPQGPPPS-------------VLLHP-LHGPPG-----GHHHHHPLHLPTHPAALQLLSH 507
            |....|...||||             .:..| |....|     |..::||   .|.|||.| ...
 Frog   458 LDTPESTCTPPPSCDTDIFSYSGQEYAIRSPTLQETMGASMRFGAQYYHP---STQPAAFQ-FPQ 518

  Fly   508 YHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGG 550
            |.|..|.|:..||...... .::...|:..|.|| .:.|:.||
 Frog   519 YSQYSQYQRLPQHSLTPTS-PEEASFLTVPGSNP-PSVLAYGG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 21/101 (21%)
Homeodomain 349..405 CDD:459649 23/55 (42%)
noboxXP_031761569.1 Homeodomain 260..316 CDD:459649 23/55 (42%)

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