DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and pax3b

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001315326.1 Gene:pax3b / 100150137 ZFINID:ZDB-GENE-080917-53 Length:469 Species:Danio rerio


Alignment Length:554 Identity:155/554 - (27%)
Similarity:224/554 - (40%) Gaps:156/554 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTSVQIPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAV 147
            |..|..|.|.|.....||: ...|.|..:.:     :|:::|.:.. |:|...|::.:....|.|
Zfish    26 PMEVSTPMGQGRVNQLGGV-FINGRPLPNHI-----RHKIVEMAHH-GIRPCVISRQLRVSHGCV 83

  Fly   148 SKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATA 206
            ||:|      ||:| ||.|||:|.|..:|.|..::|:||||||.||:||||::|:.||:|.....
Zfish    84 SKILCRYQETGSIR-PGAIGGTKSKTTSPDVEKRVEEYKRENPGIFSWEIRDKLLKEGICDRNNV 147

  Fly   207 PSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALW 271
            |:||||:||:|.|:..|...|                                            
Zfish   148 PTVSSISRIMRGRSGTRADEE-------------------------------------------- 168

  Fly   272 SVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHID 336
                       ........:.......:||..|....|...:|: ||          :||...::
Zfish   169 -----------EEEEDEEDIERREREENAHRGAHSIEGILADRS-SP----------SDEGSEVE 211

  Fly   337 SDYLDDDDEP---KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSN 398
            |    :.|.|   |.||:||||:.:||||||:.|:::|||.:.|||.|:.|..|:||||||||||
Zfish   212 S----EPDLPLKRKQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSN 272

  Fly   399 RRAKWRRHQRMN-LLKRQRSSPANPLHSQQSNDAP---ASSPTPSNHSSASTSAPVAPVPPPQ-- 457
            |||:||:....| |:......|....|...|:.:|   :.||.|             |...||  
Zfish   273 RRARWRKQAGANQLMAFNHLIPGGFSHHAMSSLSPYQLSESPYP-------------PAALPQDS 324

  Fly   458 ------QPLPLCGDHSPQGPPP----SVLLHPLHGPPG-----GHHHHHPLHLPTHPAALQLLSH 507
                  ||||.....|..|..|    |..|...||..|     |.|:.|..:...:..:.|::. 
Zfish   325 GTVHRPQPLPHSSHQSSGGAGPEGGASYCLSSRHGYTGYSDAFGPHNTHNNNAINNGLSSQVMG- 388

  Fly   508 YHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGC-NPAANHLSMGGERSAFRSL------VSSPSAA 565
                                     .::|||. :|.....|:....|...|.      :||..|.
Zfish   389 -------------------------LITPSGASHPTQAEFSLDSGSSVSSSCSQRMESLSSLPAL 428

  Fly   566 AFLGLARQYAVAASLTVAEEQRSRLHYSAGGLGS 599
            :.|...:.|:.|:..::  |......||..|..|
Zfish   429 SNLSNPQSYSSASFYSL--EHSGHYQYSQYGQNS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 46/102 (45%)
Homeobox 352..404 CDD:278475 33/51 (65%)
pax3bNP_001315326.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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