DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and Sdcbp

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_114192.1 Gene:Sdcbp / 83841 RGDID:621497 Length:300 Species:Rattus norvegicus


Alignment Length:84 Identity:21/84 - (25%)
Similarity:36/84 - (42%) Gaps:9/84 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSR---FGLRGYDLA 150
            |....:|.....:..:|.||..|...:....::||.   |.|.:.|.:.|::.   .||:...:|
  Rat   196 PFERTVTMHKDSSGHVGFIFKSGKITSIVKDSSAAR---NGLLTDHHICEINGQNVIGLKDAQIA 257

  Fly   151 QHMLSQQGAVSKLLGTLRP 169
            . :||..|.|..:  |:.|
  Rat   258 D-ILSTAGTVVTI--TIMP 273

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 11/39 (28%)
Homeobox 388..440 CDD:278475
SdcbpNP_114192.1 Interaction with PDCD6IP. /evidence=ECO:0000250|UniProtKB:O08992 2..104
LYPX(n)L motif 1. /evidence=ECO:0000250|UniProtKB:O08992 3..7
LYPX(n)L motif 2. /evidence=ECO:0000250|UniProtKB:O08992 47..51
LYPX(n)L motif 3. /evidence=ECO:0000250|UniProtKB:O08992 51..55
PDZ_signaling 114..193 CDD:238492
PDZ_signaling 198..271 CDD:238492 18/78 (23%)