DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Hhex

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_077361.1 Gene:Hhex / 79237 RGDID:619932 Length:271 Species:Rattus norvegicus


Alignment Length:302 Identity:73/302 - (24%)
Similarity:100/302 - (33%) Gaps:110/302 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 PTHPHPYTSF---------------PTWPA--HHPLWGAVPLATPPGGGPAGAGGALQPGGSGSS 300
            ||.|.|.:||               |..||  |||   |..||.  ..||.|.||.|.|      
  Rat    50 PTLPSPNSSFTSLVSSYRTPVYEPTPVHPAFSHHP---AAALAA--AYGPGGFGGPLYP------ 103

  Fly   301 YGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRDSRSPDADANR 365
                     .|.:.|..|.....|:          ..|...|..|.|                  
  Rat   104 ---------FPRTVNDYTHALLRHD----------PLGKPLLWNPFL------------------ 131

  Fly   366 MIDIEGEDSESQDSDQPKFRR--NRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARV 428
                          .:|..:|  .:..||.:|..||||:|:...|.....|::||....|||.:|
  Rat   132 --------------QRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQV 182

  Fly   429 QVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYP 493
            :.||.||||||||      :||.:..|.......                  ::..|..|.|..|
  Rat   183 KTWFQNRRAKWRR------LKQENPQSNKKDELD------------------SLDTSCDQGQDLP 223

  Fly   494 YSTSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHME 535
            ...:...:..||..:..|.:..:|.|::|.     .|:|.::
  Rat   224 SEQNKGASLDSSQCSPSPASPEDPESEISE-----DSDQEVD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 23/51 (45%)
HhexNP_077361.1 Homeobox 143..195 CDD:395001 24/51 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.