DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and hmx3

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:314 Identity:77/314 - (24%)
Similarity:110/314 - (35%) Gaps:88/314 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 SVSSINRILRNRAAERAAAEFA--RAASYG--YAIHP----THPH---PYTSFPTWPAHH----P 270
            |:.|:.....:||.....|.|.  :.|..|  :|:.|    |.|.   |...| ..|||:    |
 Frog    19 SIKSLLTCEPSRAVRPHKALFTPIKGALDGAAFALSPLTDLTFPRLEIPAQRF-ALPAHYLERSP 82

  Fly   271 LW---------GAVPLATPPGG----GPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSN 322
            .|         |..|....|..    ||                       ::|.|.....:...
 Frog    83 AWWYSYTLAHGGHTPRTEVPDKSLLLGP-----------------------TSPVSGGERDSPEP 124

  Fly   323 GHNTNSGSGCGDSSAGS-GRLSLPALSPDSGSRDSRSPDADANRMIDIEGED----SESQDSDQP 382
            .|...:.....||.:.| ..:.|....|:.|.:|.             .|||    .||.|....
 Frog   125 IHPLKAELEAKDSESKSPEEIILEESEPEEGKKDD-------------SGEDWKKREESPDKKPC 176

  Fly   383 KFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRH----- 442
            :.::.||.||..|:.:||..||...|...:.|..|||...|:|.:|::||.|||.||:|.     
 Frog   177 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAEL 241

  Fly   443 -------------QRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPVAVP 483
                         .||.::...:|.|..|:.:....||..|:...|.||..:.|
 Frog   242 EAANLSHAAAQRIVRVPILYHENSSSAESASSAANVPVSQPLLTFPHPVYYSHP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 2/8 (25%)
Homeobox 388..440 CDD:278475 23/51 (45%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 20/121 (17%)
Homeobox 181..235 CDD:365835 24/53 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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