DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and nkx6.3

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001159612.1 Gene:nkx6.3 / 558978 ZFINID:ZDB-GENE-070810-7 Length:272 Species:Danio rerio


Alignment Length:191 Identity:47/191 - (24%)
Similarity:79/191 - (41%) Gaps:25/191 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 GPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAG---------S 339
            |||.....||   :|:.:|....:|.:..|........:|:.:..|.|....|.|         |
Zfish    39 GPANINSQLQ---AGTPHGISDILSRSMVSGPGTPALLSGYPSMGGFGTTVPSPGVYYNRDYTPS 100

  Fly   340 GRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDS------DQPKFRRNRTTFSPEQLDE 398
            |..:.|....:......:|.....:...:..|...:..::      :..|.:..|.|||..|:..
Zfish   101 GLSTFPKPVVECAGMKGKSSSCWVDGGYEWRGARQQCGNNMGHNPENVGKKKHTRPTFSGHQIFA 165

  Fly   399 LEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSS 459
            |||.|:::.|.....|.:||....::|::|:|||.|||.|||:       |....||::.:
Zfish   166 LEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK-------KSATEPSSTQT 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 22/51 (43%)
nkx6.3NP_001159612.1 Homeobox 154..207 CDD:278475 22/52 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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