DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Crxos

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001028810.1 Gene:Crxos / 546024 MGIID:2451355 Length:246 Species:Mus musculus


Alignment Length:104 Identity:32/104 - (30%)
Similarity:46/104 - (44%) Gaps:20/104 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 FSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIK-QRDSP 454
            ||.|||.|||..|....||.:..|:.:|.|..|.|.:|:.||..|..:  ...|..|.: |:.:.
Mouse    20 FSWEQLSELEAYFKVEPYPDLQDRKIMATRLKLKEEQVEAWFIQRSLE--EEMRPPLARLQQSAL 82

  Fly   455 STSSSPT--------PLVNPVVSPVSPIPVPVPVAVPES 485
            ..:|||:        |.....:.|::|         |||
Mouse    83 DGTSSPSHKALCCRPPSWKYRLIPINP---------PES 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 20/48 (42%)
CrxosNP_001028810.1 Homeobox 20..61 CDD:278475 17/40 (43%)
homeodomain 127..179 CDD:238039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.