DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and PAX6

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001355839.1 Gene:PAX6 / 5080 HGNCID:8620 Length:503 Species:Homo sapiens


Alignment Length:598 Identity:182/598 - (30%)
Similarity:255/598 - (42%) Gaps:184/598 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IRVSLPGAAPAIPATATAGSQSPGAIMPMAAVPLPSHLQLLGSSAGGVGQPAAITPVSPTAATTV 80
            ||.....|||:....|..|.:|..|.: ..||...:.|..|..:.||              .|.:
Human    20 IRAPWNPAAPSQSQHAEQGGRSSAAEI-KRAVAGANRLPALSLTCGG--------------RTCL 69

  Fly    81 LAQPHSLSPSTP--ILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFG 143
            ..:|   ||.:.  :.|.|......|||:|..|.....              :::.:::||:..|
Human    70 WLKP---SPGSDSHVCTGGHSGVNQLGGVFVNGRPLPD--------------STRQKIVELAHSG 117

  Fly   144 LRGYDLAQHMLSQQGAVSKLL------GTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAW 202
            .|..|:::.:....|.|||:|      |::||.. ||||||:||||.|||||.|||||.|:||||
Human   118 ARPCDISRILQVSNGCVSKILGRYYETGSIRPRA-IGGSKPRVATPEVVSKIAQYKRECPSIFAW 181

  Fly   203 EIRERLITEGVCTNATAPSVSSINRILRNRAAER----AAAEF-------ARAASYGYAIHPTHP 256
            |||:||::||||||...||||||||:|||.|:|:    |...:       .:..|:|     |.|
Human   182 EIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWG-----TRP 241

  Fly   257 --HPYTSFPTWPAHHPLWGAVPLATPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTT 319
              :|.||.|                   |.|...|...|.||                       
Human   242 GWYPGTSVP-------------------GQPTQDGCQQQEGG----------------------- 264

  Fly   320 HSNGHNTNSGSGCG-DSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPK 383
               |.||||.|..| ||.....||.|                                    :.|
Human   265 ---GENTNSISSNGEDSDEAQMRLQL------------------------------------KRK 290

  Fly   384 FRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLI 448
            .:||||:|:.||::.|||||:::|||.|..||:|||:..|.|||:|||||||||||||.:::...
Human   291 LQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQ 355

  Fly   449 KQRDS------PSTSSSPTPLVNPVVSPVSPI------------------------PVPVPVAVP 483
            :::.|      |.:||..|.:..|:..|.:|:                        |:| ...:.
Human   356 RRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMP-SFTMA 419

  Fly   484 ESGQQKQPYPYSTSN-MCNTSSSSS-NSQPCNTINP---GSKMSSKTSSVSSNQHMEEPAAAVAT 543
            .:...:.|.|..||: .|...:|.| |.:..:|..|   .:.|:|:....|.       ..:...
Human   420 NNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSG-------TTSTGL 477

  Fly   544 ASPTASAPLSMGG 556
            .||..|.|:.:.|
Human   478 ISPGVSVPVQVPG 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 57/101 (56%)
Homeobox 388..440 CDD:278475 33/51 (65%)
PAX6NP_001355839.1 PAX 85..209 CDD:128645 63/138 (46%)
Homeobox 295..348 CDD:395001 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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