DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and PAX4

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens


Alignment Length:481 Identity:132/481 - (27%)
Similarity:180/481 - (37%) Gaps:168/481 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLL---- 164
            |||:|..|...              .|.::.:::.|:..|:|..|:::.:....|.|||:|    
Human    12 LGGLFVNGRPL--------------PLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYY 62

  Fly   165 --GTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINR 227
              |.|.|.| ||||||::|||.||::|.|.|.|.|.:|||||:.:|..||:||....||||||||
Human    63 RTGVLEPKG-IGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINR 126

  Fly   228 ILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLATPPGGGPAGAGGAL 292
            :||                                                            ||
Human   127 VLR------------------------------------------------------------AL 131

  Fly   293 QPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPA------LSPDS 351
            |                                .:.|..|       .||..||      |:|.|
Human   132 Q--------------------------------EDQGLPC-------TRLRSPAVLAPAVLTPHS 157

  Fly   352 GSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREK 416
            ||...|.......                    .||||.|||.|.:.|||||.:..||....|.|
Human   158 GSETPRGTHPGTG--------------------HRNRTIFSPSQAEALEKEFQRGQYPDSVARGK 202

  Fly   417 LAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPT-PLVNPVVSPVSPIPVPVPV 480
            ||..|:|.|..|:||||||||||||.:::..  :...|..|...| |.|.|.:......|..||.
Human   203 LATATSLPEDTVRVWFSNRRAKWRRQEKLKW--EMQLPGASQGLTVPRVAPGIISAQQSPGSVPT 265

  Fly   481 AVPESGQQKQPYPYSTSNMCNTSSSS---SNSQPCNTINP-----GSKMSSKTSSV------SSN 531
            |...:   .:|...|...:|..::..   |::.|...:.|     ..:.:|..|.:      ||:
Human   266 AALPA---LEPLGPSCYQLCWATAPERCLSDTPPKACLKPCWGHLPPQPNSLDSGLLCLPCPSSH 327

  Fly   532 QHMEEPAAAVATASPTASAPLSMGGE 557
            .|:...:.:.|...|  ..||..|.|
Human   328 CHLASLSGSQALLWP--GCPLLYGLE 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 47/101 (47%)
Homeobox 388..440 CDD:278475 30/51 (59%)
PAX4NP_001353039.1 PAX 5..129 CDD:128645 53/131 (40%)
Homeobox 174..226 CDD:306543 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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