DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and PAX2

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_003981.3 Gene:PAX2 / 5076 HGNCID:8616 Length:432 Species:Homo sapiens


Alignment Length:514 Identity:141/514 - (27%)
Similarity:192/514 - (37%) Gaps:171/514 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLR 168
            |||:|..|...  |...            :.|::||:..|:|..|:::.:....|.|||:||...
Human    23 LGGVFVNGRPL--PDVV------------RQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYY 73

  Fly   169 -----PPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRI 228
                 .||:|||||||||||.||.||.:|||:|||:||||||:||:.||:|.|.|.|||||||||
Human    74 ETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRI 138

  Fly   229 LRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLATPPGGGPAGAGGALQ 293
            :|.:..:              ..||| |....:..|.|.|        ...|....|..:..:..
Human   139 IRTKVQQ--------------PFHPT-PDGAGTGVTAPGH--------TIVPSTASPPVSSASND 180

  Fly   294 PGGSGSSYGSDGNMSSNPNSSNSN--TTHSNGHNTNSGSG------CGDSSAGSGRLSLPALSPD 350
            |.||.|..|..|...||......:  ..:::..:...|.|      ..|.|.|    |:|     
Human   181 PVGSYSINGILGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEG----SVP----- 236

  Fly   351 SGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCV---- 411
                               .|:.....||.:...|.:  ||:.:||:.|::.|::..||.|    
Human   237 -------------------NGDSQSGVDSLRKHLRAD--TFTQQQLEALDRVFERPSYPDVFQAS 280

  Fly   412 --------NTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVV 468
                    |.....|....|.|.:                          .|.|:|..|.:...|
Human   281 EHIKSEQGNEYSLPALTPGLDEVK--------------------------SSLSASTNPELGSNV 319

  Fly   469 SPVSPIPVPV------------PVAVPESGQQKQPYPYST-SNMCNTSSSSSNSQPCNTINPGSK 520
            |.....||..            |..||.:||..  ||.|| :.|.                |||:
Human   320 SGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGS--YPTSTLAGMV----------------PGSE 366

  Fly   521 MSSKTSS----VSSNQ--HMEEPAAAVATASPTASAPLSMGGENSAFRALPMTLPMPMT 573
            .|....|    .:.|:  ....||..:    |...||           .||: ||:|||
Human   367 FSGNPYSHPQYTAYNEAWRFSNPALLM----PPPGAP-----------PLPL-LPLPMT 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 57/100 (57%)
Homeobox 388..440 CDD:278475 13/63 (21%)
PAX2NP_003981.3 PAX 16..140 CDD:128645 63/130 (48%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 18/65 (28%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 33/47 (70%)
homeodomain 255..>278 CDD:412151 9/22 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 6/46 (13%)
Pax2_C 305..>390 CDD:403565 24/102 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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