DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and hbn

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster


Alignment Length:401 Identity:106/401 - (26%)
Similarity:160/401 - (39%) Gaps:109/401 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 SVSSINRILRNRAAERAAAEFARAASYGYAI--HPTHPHPYTSFPTWPAHHPLWGAVPLATPPGG 283
            :|.||::||.|:      .:..|:.:....:  ||.|.||:      ..||              
  Fly    35 AVYSIDQILGNQ------HQIKRSDTPSEVLITHPHHGHPH------HIHH-------------- 73

  Fly   284 GPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALS 348
                                  ..|||.|.|| :.:|......:.............:|.:.|..
  Fly    74 ----------------------LHSSNSNGSN-HLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKR 115

  Fly   349 PDSGSRDSRSPDADANRMIDIEGEDSES-------QDSDQP-KFRRNRTTFSPEQLDELEKEFDK 405
            .||.:      :.|....:|.:.|.|.|       .|.::| |.||:||||:..||.:||:.|:|
  Fly   116 EDSPT------NTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEK 174

  Fly   406 SHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDS-----PSTSSSPTPLVN 465
            :.||.|.|||.||.|..||||||||||.|||||||:.::   ...:|.     |.......||  
  Fly   175 TQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK---FMNQDKAGYLLPEQGLPEFPL-- 234

  Fly   466 PVVSPVSPIPVPVPVAVP--ESGQQKQPYP--YSTSNMCN-TSSSSSNSQPCNTINPGSKMS--- 522
                   .||:| |..:|  ....|.:.:|  ::.....| .:::::...|.:.:.|..|:.   
  Fly   235 -------GIPLP-PHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFH 291

  Fly   523 ---SKTSSVSSNQHMEEPAAAVATASPTASAP--LSMGG------------ENSAFRALPMTLPM 570
               |:...:|:...:....||.|.|:.:|..|  ||:..            .||:.|..|..:|.
  Fly   292 TLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVPH 356

  Fly   571 PMTLPTASAAA 581
            | |.|.|:..|
  Fly   357 P-TPPHATPPA 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 4/8 (50%)
Homeobox 388..440 CDD:278475 34/51 (67%)
hbnNP_788420.1 Homeobox 156..209 CDD:278475 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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