DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and E5

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:481 Identity:116/481 - (24%)
Similarity:168/481 - (34%) Gaps:152/481 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PTRTTAAIRVSLPGAAPAIPATATAGSQSPGAIMPMAAVPLPSHLQLLGSSAGGVGQPAAITPVS 73
            ||....:...|:..::.::.|::|..:.:  :..|..|..:.|   ::|.|:         |..:
  Fly    16 PTSPFVSSSSSVAASSTSVSASSTVSASA--SSKPKLAFSIDS---IVGESS---------TRSA 66

  Fly    74 PTAATTVLA-QPHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLL 137
            |...:.:.: .|.|.||::|..|..:......|.|:|                      .:...|
  Fly    67 PLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYC----------------------RRRDSL 109

  Fly   138 ELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAW 202
            :.||            ..|:..||:   :..||.  .|..|..|..|..|........||...  
  Fly   110 DRSR------------SPQRSPVSR---SPSPPN--AGGNPAAAGNTAKSGDPSSGTGNPPTL-- 155

  Fly   203 EIRERLITEGVCTNATAPSVSSI-NRILRNRAAER--------------AAAEFARAASYGYAIH 252
             ||...:        .||:::.| ||...|..|.|              .||:|..||:.     
  Fly   156 -IRPLPL--------PAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAAL----- 206

  Fly   253 PTHPHPYTS---------FPTWPAH--HPLWGAVPLATPPGGGPAGAGGALQPGGSGSSYGSDGN 306
             .|.|....         .||.|.|  ||       ..|||..|.|    :.|||          
  Fly   207 -AHHHQQQQQQQQQQLPPVPTGPPHGPHP-------HLPPGQIPLG----IFPGG---------- 249

  Fly   307 MSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRDSR-SPDADANRMIDIE 370
                |:.         ||....|.....|:....|.|.| |.|...||..| .|....|.:.   
  Fly   250 ----PHP---------GHPPPHGHHPFGSAPHLIRDSYP-LYPWLLSRHGRIFPRFPGNFLF--- 297

  Fly   371 GEDSESQDSDQP--KFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFS 433
                      ||  |.:|.||.|||.||.:||..|:.:||.....|::||...:|:|.:|:|||.
  Fly   298 ----------QPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQ 352

  Fly   434 NRRAKWRRHQRVNLIKQRDSPSTSSS 459
            |||.|.:|.|:    :..|...|.|:
  Fly   353 NRRTKHKRMQQ----EGGDGSDTKSN 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 22/96 (23%)
Homeobox 388..440 CDD:278475 25/51 (49%)
E5NP_524825.1 Homeobox 307..359 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I3587
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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