DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and gsx1

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001012251.1 Gene:gsx1 / 449875 ZFINID:ZDB-GENE-041008-135 Length:243 Species:Danio rerio


Alignment Length:214 Identity:59/214 - (27%)
Similarity:84/214 - (39%) Gaps:66/214 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 YGYAIHPTHP-HPYTSFPTWPAH------------------HPLWGAVPLATPPGGGPAGAGGAL 292
            :.||:||:|| |   |......|                  ||...|:||..             
Zfish    27 FPYAVHPSHPLH---SLSAGSCHSRKAGLLCFCPLCVTSQLHPSPPALPLIK------------- 75

  Fly   293 QPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRDSR 357
                  :|:.:.|....:...|..::| |:|.|.|||||...:       :.|.           
Zfish    76 ------ASFPAFGTQYCHSALSRQHST-SSGVNLNSGSGLYQA-------AYPV----------- 115

  Fly   358 SPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTA 422
             ||......|.||...|:.|.|     :|.||.|:..||.|||:||..:.|.....|.::|....
Zfish   116 -PDPRQFHCISIENSSSQLQSS-----KRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLN 174

  Fly   423 LSEARVQVWFSNRRAKWRR 441
            |||.:|::||.|||.|.::
Zfish   175 LSEKQVKIWFQNRRVKHKK 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 23/51 (45%)
gsx1NP_001012251.1 Homeobox 140..192 CDD:278475 23/51 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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