DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Poxm

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster


Alignment Length:456 Identity:115/456 - (25%)
Similarity:171/456 - (37%) Gaps:159/456 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYD 148
            |.|..|....:.|       |||:|..|.....              |::.|::||:|.|:|..|
  Fly     3 PESQCPQYGEVNQ-------LGGVFVNGRPLPN--------------ATRMRIVELARLGIRPCD 46

  Fly   149 LAQHMLSQQGAVSKLLGTLRP-----PGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERL 208
            :::.:....|.|||:|.....     ||.||||||:|.||.||:.|.:.|:.:|.|||||||:||
  Fly    47 ISRQLRVSHGCVSKILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRL 111

  Fly   209 ITEGVCTNATAPSVSSINRILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWG 273
            ::||:|.....||||||:|||||           :..|.|:                 .|.|   
  Fly   112 LSEGICDKTNVPSVSSISRILRN-----------KLGSLGH-----------------QHTP--- 145

  Fly   274 AVPLATPPGGGPAGAGGALQPGG---SGSSYGSDGNMSS--NPNSSNSNTTHSNGHNTNSGSGCG 333
                .|..|.|.:..||::...|   :|:|..::.|:|:  ||.....:..|.:.|.:.:.:...
  Fly   146 ----GTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHHHHQSAAAAASA 206

  Fly   334 D--------------------SSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQD 378
            .                    |:|.:..:..|..||        ||...|.      |:.|... 
  Fly   207 HHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSP--------SPPQGAG------GQGSVPH- 256

  Fly   379 SDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQ 443
                          |.||..:......:|:|..::...:.|                     .||
  Fly   257 --------------PHQLRSVAAAAAAAHWPSSHSVSDILA---------------------HHQ 286

  Fly   444 RVNLIKQRDSPSTSSSPTPL----VNPVVSPVSPIPV-PVPVAVPESGQ----------QKQPYP 493
            .|.|        .:|....:    :..:.|.|||:|: |.|||....||          |:.||.
  Fly   287 AVAL--------RASCQVGVGVGGMGGMGSTVSPLPMTPSPVAGTAGGQPLLDCEGGAGQQSPYN 343

  Fly   494 Y 494
            |
  Fly   344 Y 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 48/100 (48%)
Homeobox 388..440 CDD:278475 6/51 (12%)
PoxmNP_001036687.1 PAX 10..133 CDD:128645 55/143 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450799
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.