DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and gsb-n

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:507 Identity:143/507 - (28%)
Similarity:197/507 - (38%) Gaps:177/507 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LAQPHSLSP---STPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRL--LELS 140
            ::..:||.|   ..|.  ||......|||:|..|                ..|.:..||  :|::
  Fly     3 MSSANSLRPLFAGYPF--QGQGRVNQLGGVFING----------------RPLPNHIRLKIVEMA 49

  Fly   141 RFGLRGYDLAQHMLSQQGAVSKLL------GTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTI 199
            ..|:|...:::.:....|.|||:|      |::| ||:||||||||.:|.:.::|::.::|||:|
  Fly    50 ASGVRPCVISRQLRVSHGCVSKILNRYQETGSIR-PGVIGGSKPKVTSPEIETRIDELRKENPSI 113

  Fly   200 FAWEIRERLITEGVCTNATAPSVSSINRILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPT 264
            |:|||||:||.||.   |..||.|||:|:||                                  
  Fly   114 FSWEIREKLIKEGF---ADPPSTSSISRLLR---------------------------------- 141

  Fly   265 WPAHHPLWGAVPLATPPGGGPAGAGGALQPGGSGSSYGS-DGNMSSNPNSSNSNTTHSNGHNTNS 328
                                             ||..|| ||......|                
  Fly   142 ---------------------------------GSDRGSEDGRKDYTIN---------------- 157

  Fly   329 GSGCGDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSP 393
                       |.|         |.|||           ||...:||.....:.|.||:||||:.
  Fly   158 -----------GIL---------GGRDS-----------DISDTESEPGIPLKRKQRRSRTTFTA 191

  Fly   394 EQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSS 458
            |||:.||:.|.::.||.|.|||:||..|||:|||:|||||||||:.|:|            |..|
  Fly   192 EQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH------------SGGS 244

  Fly   459 SPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSKMSS 523
                  |..:||::.....|.|.|..|| ...|..|..   ....|.:..|....|...|:.|: 
  Fly   245 ------NSGLSPMNSGSSNVGVGVGLSG-ATAPLGYGP---LGVGSMAGYSPAPGTTATGAGMN- 298

  Fly   524 KTSSVSSNQHMEEPAAAVATASPTASAPLSMGG----ENSAFRALPMTLPMP 571
              ..|....|......:.|||:..|.....|||    :::|....|.....|
  Fly   299 --DGVHHAAHAPSSHHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQP 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 45/103 (44%)
Homeobox 388..440 CDD:278475 33/51 (65%)
gsb-nNP_523862.1 PAX 20..141 CDD:278709 52/140 (37%)
Homeobox 185..238 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450816
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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