DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and otp

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:389 Identity:95/389 - (24%)
Similarity:155/389 - (39%) Gaps:129/389 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 GGGPAGAG--GALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSL 344
            |||..|.|  |.:..||..:.....|.:..|.|:       .||.|.:||:|.|:::.|:|.   
  Fly    45 GGGAGGGGSSGGVPVGGGVARLHISGGLCDNSNA-------LNGGNGSSGNGNGNNNNGNGN--- 99

  Fly   345 PALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYP 409
                             :.|.|      ..:.|..|:.|.:|:||.|:|.||:|||:.|.|:|||
  Fly   100 -----------------NNNSM------QQQDQHLDKNKQKRHRTRFTPAQLNELERCFSKTHYP 141

  Fly   410 CVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVN--------LIKQRDSPSTSSSPTPL--- 463
            .:..||::|.|..|:|:||||||.||||||::.::..        |:.....|...::.|.:   
  Fly   142 DIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRTPGALLPSHGLPPFGANITNIAMG 206

  Fly   464 -----------------VNPVVSPVSPIPVPVPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQP 511
                             |||:.:..              ||..|..|.         |||.||..
  Fly   207 DGLCGTGMFGGDRWSVGVNPMTAGF--------------GQLNQSSPL---------SSSLNSGL 248

  Fly   512 CNTINPGSKMSSKT------SSVSSN---QHMEEPAAAVATASPTASAPLSMGGENSAFRALPMT 567
            .:.||.||.:.:.:      :::..:   ||.....:...:.||:|:.|.:|...:|       .
  Fly   249 NSGINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVSCGPSGSPSATTPPNMNSCSS-------V 306

  Fly   568 LPMPMTL-PTASAAAFALSFARQYIAKYMGTPLNLGHGSSPIQAQSGRDHQSEEREYEDEQEEE 630
            .|.|::. |.:|.            .:..|.|:.|              ||.::::....|:::
  Fly   307 TPPPLSAQPNSSQ------------NELNGEPMPL--------------HQQQQQQTHQHQQQQ 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 31/51 (61%)
otpNP_001286654.1 Homeobox 119..167 CDD:278475 26/47 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450807
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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