DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Poxn

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:446 Identity:126/446 - (28%)
Similarity:169/446 - (37%) Gaps:162/446 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYD 148
            ||:          |......|||:|..|...  |...            :.|:::|:..|:|..|
  Fly     2 PHT----------GQAGVNQLGGVFVNGRPL--PDCV------------RRRIVDLALCGVRPCD 42

  Fly   149 LAQHMLSQQGAVSKLL------GTLRPPGLIGGSKPK-VATPTVVSKIEQYKRENPTIFAWEIRE 206
            :::.:|...|.|||:|      |::| ||.|||||.| |||||||.||.:.|.||..:|||||||
  Fly    43 ISRQLLVSHGCVSKILTRFYETGSIR-PGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIRE 106

  Fly   207 RLITEGVCTNATAPSVSSINRILRN-------------RAAERAAAEFARAASYGYAIHPTH--- 255
            :|..:.||..::.||:|||||||||             .||..|||  |.||::.....|::   
  Fly   107 QLQQQRVCDPSSVPSISSINRILRNSGLWTDEMTSSQQNAAAAAAA--AAAAAHQAGSGPSNGYG 169

  Fly   256 ----PHPYTSFPTWPAHHPLWGAVPLATPP-------GGGPAGAGGALQPG-GSGSSYGSDGNMS 308
                |.|.|..|..||..|  .....|.||       |..|......:.|. |.|.|:|.:.|:|
  Fly   170 GQAPPPPVTVAPPTPAATP--SIARYAKPPALMMNSAGEMPIKPAPKMPPSMGHGHSHGLNPNVS 232

  Fly   309 S--------------NPN---------------------------------SSNSNTTHSNGHNT 326
            .              ||:                                 ::.:::|.:.|..|
  Fly   233 GLDLSYSALHKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALGGFT 297

  Fly   327 NSGS--------GCGD-------------------SSAGSGRLSLPALSPDSGSRDSR------- 357
            .|.|        ..||                   |..|:|..|.|..||.|....||       
  Fly   298 KSESSIDLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPYSI 362

  Fly   358 -----SPD----ADANRMIDIEGEDSE-SQDSD-QPKFRRNRTTFSPEQLDELEKE 402
                 .|:    .|:||:..:|....| ||||. .|...      :||..|..|.|
  Fly   363 EELLKKPEKRLRLDSNRLECLESSSCESSQDSPVAPPLE------TPEDEDPAEAE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 51/102 (50%)
Homeobox 388..440 CDD:278475 5/15 (33%)
PoxnNP_001261016.1 HTH 5..133 CDD:304362 61/142 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450835
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.