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Protein Alignment toe and Rhox12
DIOPT Version :9
Sequence 1: | NP_524041.2 |
Gene: | toe / 39418 |
FlyBaseID: | FBgn0036285 |
Length: | 640 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020072.1 |
Gene: | Rhox12 / 363437 |
RGDID: | 1563789 |
Length: | 175 |
Species: | Rattus norvegicus |
Alignment Length: | 143 |
Identity: | 47/143 - (32%) |
Similarity: | 70/143 - (48%) |
Gaps: | 25/143 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 329 GSGCGDSSA-GSGRLSLPALSPDSGSRDSRSPDADANRM-IDIEGE-------DSESQDSDQ--- 381
|...|:.|. ||.:|....: || :|.|....|...: .|::.| ..:||..:|
Rat 32 GGSFGEGSLNGSDKLKYEGI-PD---KDDRIYVGDVKYIGNDVKDEYRGSHQGSGDSQLEEQKNL 92
Fly 382 -----PKFRRNRTT----FSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRA 437
|:|||.|.. .:|.||.|||..|:.:.||.|.||..||....|:|:||:.||..|||
Rat 93 ASPTIPQFRRTRPRIQLGLTPRQLSELEDFFETTKYPDVITRRNLAKHLYLAESRVKRWFKRRRA 157
Fly 438 KWRRHQRVNLIKQ 450
::|:.|:..::|:
Rat 158 RYRKEQQTQMLKR 170
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
toe | NP_524041.2 |
HTH |
134..230 |
CDD:304362 |
|
Homeobox |
388..440 |
CDD:278475 |
24/55 (44%) |
Rhox12 | NP_001020072.1 |
homeodomain |
101..163 |
CDD:238039 |
27/61 (44%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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