Protein Alignment toe and pdm3

DIOPT Version :9

• Sequence 1: NP_524041.2
• Gene: toe / 39418
• FlyBaseID: FBgn0036285
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Alignment Length: 678
• Identity: 135/678 - (19%)
• Similarity: 220/678 - (32%)
• Gaps: 181/678 - (26%)

  Fly    13 TAAIRVSLPGAAPAI---PATATAGSQSPGAIMPMAAVPLPSH------LQLLGSSAGGVG---- 64
            |||...||.|.|.::   |...:.|.:......|..|...|:|      ....|||..|.|
  Fly   449 TAAALASLQGLAASVFNSPLNLSVGGEPVATTGPSVAPTSPTHNGGKSKTAKGGSSGNGSGGSSA 513

  Fly    65 -----------QP----AAITPVSPTAATTVLAQPHSLSPSTPILTQGAPPAAALGG--IFCGGS 112
                       ||    ::.:|..|.:|:: ||...:.:.::|..:..||||:|...  |...|.
  Fly   514 NSGTSSAQQQQQPDNPSSSSSPHHPLSASS-LANVLAAATASPPPSLQAPPASAQMPQLILASGQ 577

  Fly   113 AAAG--------PGAAAAAATNLNALASQHRLLELSRF------GLRGYDLAQHMLSQQGAVSKL 163
            ...|        |.|...|...:..:....::....:|      ....|...|....||
  Fly   578 LVQGVQGAQLLIPTAQGIAVQTILTIPVSPQIPTTEQFLPNAFGAFASYQQQQQQQQQQ------ 636

  Fly   164 LGTLRPPGLI----GGSKPKVA-TPTVVSKIEQYKRENPTIFAWEIRE-------RLITEGVCTN 216
             ..|.||.|.    ..:.|::| |||.:.|        |.:|:..:::       .|......|:
  Fly   637 -RDLLPPSLAALQHATALPQLAQTPTNLLK--------PNLFSTGVQQLLTALHPELFAAAAATH 692

  Fly   217 -----ATAPSVSSINRILRNRAAER-AAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAV 275
                 .....|.......|.|..|| ...|..|....|.. |..|.|............|..|
  Fly   693 QQQQQQQQQQVQQQREREREREREREREREREREQHLGIG-HLPHSHLAADLRRSAERSPTAG-- 754

  Fly   276 PLATPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGH-NTNSGSGCGDSSAGS 339
               :|.||.|..|....||...|:::.....:...|.:.    ||.:.| .|.|.|....
  Fly   755 ---SPTGGSPGLAAKGPQPPPPGAAFLLQQQLHIKPETQ----THLHHHLQTQSTSAVSS----- 807

  Fly   340 GRLSLPALS---PDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFR-----RNRTTFSP--- 393
               :||.:|   ||    :..:|..|   :..:|...|.|..:..|:..     |..:|.||
  Fly   808 ---TLPQISLRHPD----ELTAPQMD---LKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHS 862

  Fly   394 ----------------------------EQLDELEKEFDKSHYPCVN-TREKLAARTALSEARVQ 429
                                        |:|:..|:...:||.|... ||..:::.::..
  Fly   863 PQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAG----- 922

  Fly   430 VWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPV-----VSPVSPIPVPVPVAVPESGQQK 489
                        |...:|...|.||.:|:......|.:     .||:.....|...|:...|..:
  Fly   923 ------------HHGGSLPSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPR 975

  Fly   490 QPYPY-----------STSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHMEEPAAA--- 540
            ....|           |||: |...:::.:|...|.::..:::::....::..:.:..|.|.
  Fly   976 LERDYLGNGPSSGTATSTSS-CGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATR 1039

  Fly   541 VATASPTASAPLSMGGENSAFRALPMTL 568
            .::|||...:|......:|.....|:.|
  Fly  1040 ASSASPRDDSPGPGPSTSSVSHMQPLKL 1067

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
toe	NP_524041.2	HTH	134..230	CDD:304362	20/118 (17%)
		Homeobox	388..440	CDD:278475	11/83 (13%)
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656
		Homeobox	1228..1281	CDD:278475

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910