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Protein Alignment toe and Dux4

DIOPT Version :9

Sequence 1:	NP_524041.2	Gene:	toe / 39418	FlyBaseID:	FBgn0036285	Length:	640	Species:	Drosophila melanogaster
Sequence 2:	XP_006252740.1	Gene:	Dux4 / 306226	RGDID:	1311053	Length:	357	Species:	Rattus norvegicus

Alignment Length:	230	Identity:	61/230 - (26%)
Similarity:	98/230 - (42%)	Gaps:	60/230 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   365 RMIDIE--GEDSESQDSDQPKFR---RNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALS 424
            :.::.|  .|:|:.|..|:|:.:   |:||.|:..|:|.|.:.|:|:.:|.:.||||||..|.:.
  Rat    70 KQVEFECCSEESQEQGQDKPRVKEAGRSRTHFTKFQIDILIEAFEKNRFPGIVTREKLAQETGIP 134

  Fly   425 EARVQVWFSNRRAKWRRHQRVNLIKQRDS--PSTSSSP----TPLVNPVVSPVSPIPVPVPVAVP 483
            |:|:.:||.||||   ||.......:..|  |.:|..|    |..:.|...|.|...|.:|::.|
  Rat   135 ESRIHIWFQNRRA---RHPDPKQGTRATSHPPESSQCPAQKTTGQLAPSKDPTSSCSVILPLSPP 196

  Fly   484 ES---------GQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSN---QHMEE 536
            .:         |:||| .|.:|                 .:.|...:..:....:.:   .|:.|
  Rat   197 HTPNGPLDLSRGRQKQ-LPETT-----------------VLQPSQVVQRRGDDQNPSLFIDHLSE 243

  Fly   537 PAAAVATASPTASAPLSMGGENSAFRA-LPMTLPM 570
                  ..||         ||...|.. .|:.||:
  Rat   244 ------VKSP---------GEKEGFHTQAPLQLPI 263

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.