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Protein Alignment toe and hoxa10b
DIOPT Version :9
Sequence 1: | NP_524041.2 |
Gene: | toe / 39418 |
FlyBaseID: | FBgn0036285 |
Length: | 640 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571230.2 |
Gene: | hoxa10b / 30391 |
ZFINID: | ZDB-GENE-990415-97 |
Length: | 347 |
Species: | Danio rerio |
Alignment Length: | 173 |
Identity: | 40/173 - (23%) |
Similarity: | 62/173 - (35%) |
Gaps: | 52/173 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 PPGGGPAGAGGALQPGGSGSSYGSDGNMSS--NPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRL 342
||...|.. ||.:....||.|..|| .|:|.....|.:...::.|.|.....:|.||
Zfish 217 PPTCAPCA------PGRNKELRGSTGTASSPEPPDSPEKAVTVTKAGDSKSESTANWLTAKSG-- 273
Fly 343 SLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSH 407
|:.|..::..|..||||||..:.
Zfish 274 ------------------------------------------RKKRCPYTKHQTLELEKEFLFNM 296
Fly 408 YPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQ 450
|.....|.:::....|::.:|::||.|||.|.::..|.|.|::
Zfish 297 YLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRENRIRE 339
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
toe | NP_524041.2 |
HTH |
134..230 |
CDD:304362 |
|
Homeobox |
388..440 |
CDD:278475 |
18/51 (35%) |
hoxa10b | NP_571230.2 |
Homeobox |
276..329 |
CDD:306543 |
18/52 (35%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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