DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and hoxb1b

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:306 Identity:78/306 - (25%)
Similarity:109/306 - (35%) Gaps:93/306 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 YAIHPTHPHPYTS----FPTWPAHHPLWGAVPLATPPGGGPAGAGGALQPG---GSGSSYGSDGN 306
            |.|:....:.|:|    ||....:.|...|...:..|.|.|.| |......   ..|:||....:
Zfish     7 YTIYNRGSNTYSSKVGCFPVEQEYLPSACASTNSYIPEGRPVG-GNTFTSAPHETHGTSYAQIQS 70

  Fly   307 MSSNPNSSNSNTTHSN------------GH---------------------------NTNSGSGC 332
            ...:.|.....|.|||            ||                           .|.|.|.|
Zfish    71 QPFHLNVDMGKTGHSNFCKQTRPPHSDYGHQHVLTQADDHMRLQSPGFSVVNMGANIGTYSESNC 135

  Fly   333 GDSSAGSGRLSLPAL-SPD-----SGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRN---- 387
            ...|..:......|. .|:     |.|:...|||:|::...:|:    ::...|..|.:||    
Zfish   136 RPGSVSASHYQSYAYGEPEPHGYGSFSKYQVSPDSDSDSKTNIK----QAPTFDWMKVKRNPPKT 196

  Fly   388 ---------------RTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRA 437
                           ||.|:.:||.||||||..:.|.....|.::||...|:|.:|::||.|||.
Zfish   197 VKVAEYGIHGQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRM 261

  Fly   438 KWRRHQ---------RVNLIK--QRDSPSTSSSPTPLVNPVVSPVS 472
            |.::.:         ||.|..  |....||||||.      .||.|
Zfish   262 KQKKREKEGTAPVIKRVTLCSSGQNADHSTSSSPG------ASPTS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 24/51 (47%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 6/18 (33%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeobox 212..264 CDD:306543 24/51 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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