Protein Alignment toe and Shox2

DIOPT Version :9

• Sequence 1: NP_524041.2
• Gene: toe / 39418
• FlyBaseID: FBgn0036285
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_037160.2
• Gene: Shox2 / 25546
• RGDID: 3674
• Length: 331
• Species: Rattus norvegicus
• Alignment Length: 335
• Identity: 104/335 - (31%)
• Similarity: 134/335 - (40%)
• Gaps: 94/335 - (28%)

  Fly   270 PLWGA-VPLATPPG------------GGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHS 321
            ||.|| .|....||            ||..||||    ||.|...|..|
  Rat    33 PLRGAKEPGCVEPGRDDRSSPAVRAAGGGGGAGG----GGGGGGGGGGG---------------- 77

  Fly   322 NGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRD-SRSPDAD---------ANRMIDIEGEDSES 376
                  :|.|.....||.||  .|....|.|:.: ||.|.:.         .:|..|.:|.:.|.
  Rat    78 ------AGGGGAGGGAGGGR--SPVRELDMGAAERSREPGSPRLTEVSPELKDRKEDAKGMEDEG 134

  Fly   377 QDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRR 441
            |  .:.|.||:||.|:.|||:|||:.||::|||....||:|:.|..||||||||||.|||||.|:
  Rat   135 Q--TKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRK 197

  Fly   442 HQRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYPYSTSNMCNTSSSS 506
             |...|.|.....:.|......|.|.|: |..:.:                |:...:.||.:..|
  Rat   198 -QENQLHKGVLIGAASQFEACRVAPYVN-VGALRM----------------PFQQDSHCNVTPLS 244

  Fly   507 SNSQPCNTINPGSKMSSKTSSVSSNQHMEEPAAAVATASPTASAPLSMGGENSAFRALPMTLPMP 571
            ...|....::         |:|:...|...|..|       |.||..|      |.|.|..||:
  Rat   245 FQVQAQLQLD---------SAVAHAHHHLHPHLA-------AHAPYMM------FPAPPFGLPL- 286

  Fly   572 MTLPTASAAA 581
            .||...||:|
  Rat   287 ATLAADSASA 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
toe	NP_524041.2	HTH	134..230	CDD:304362
		Homeobox	388..440	CDD:278475	33/51 (65%)
Shox2	NP_037160.2	Homeobox	143..197	CDD:395001	33/53 (62%)
		OAR	311..327	CDD:397759

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910