DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Phox2b

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_032914.1 Gene:Phox2b / 18935 MGIID:1100882 Length:314 Species:Mus musculus


Alignment Length:324 Identity:87/324 - (26%)
Similarity:131/324 - (40%) Gaps:78/324 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 SGSSY-----GSDGNMSSNPNSSNSNTTHSNGHNTN-------SGSGCGDSSAGSGRLSLPALSP 349
            :.|:|     |.|.:..::..:..|:.:.::|...|       :.|||            |:|:|
Mouse    10 NSSAYESCMAGMDTSSLASAYADFSSCSQASGFQYNPIRTTFGATSGC------------PSLTP 62

  Fly   350 DSGS----RDSRSPD--ADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHY 408
            .|.|    ||.:|..  |...::....|..:|.:     |.||.||||:..||.|||:.|.::||
Mouse    63 GSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKR-----KQRRIRTTFTSAQLKELERVFAETHY 122

  Fly   409 PCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLI-----------KQRDS-------PS 455
            |.:.|||:||.:..|:||||||||.|||||:|:.:|....           |:.||       .:
Mouse   123 PDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGSSGKKSDSSRDDESKEA 187

  Fly   456 TSSSPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSK 520
            .|:.|.....|     .|.|.|.|......|....|.|..............        .||..
Mouse   188 KSTDPDSTGGP-----GPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGG--------EPGKG 239

  Fly   521 MSSKTSSVSSNQHMEEPAAAVATASPTASAPLSMGGENSAFRALPMTLPMPMT-LPTASAAAFA 583
            .::..::.::       |||.|.|:..|....:.||....:    ...|.|:| :|.:....||
Mouse   240 GAAAAAAAAA-------AAAAAAAAAAAGGLAAAGGPGQGW----APGPGPITSIPDSLGGPFA 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 32/51 (63%)
Phox2bNP_032914.1 Homeobox 102..155 CDD:395001 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..246 15/96 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..289 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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