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Protein Alignment toe and npax-3
DIOPT Version :9
Sequence 1: | NP_524041.2 |
Gene: | toe / 39418 |
FlyBaseID: | FBgn0036285 |
Length: | 640 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_502006.2 |
Gene: | npax-3 / 187848 |
WormBaseID: | WBGene00011257 |
Length: | 205 |
Species: | Caenorhabditis elegans |
Alignment Length: | 151 |
Identity: | 35/151 - (23%) |
Similarity: | 47/151 - (31%) |
Gaps: | 55/151 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 293 QPGGSGSSYGSDGNMSSNPNSSNSNTT-----------------------------------HSN 322
|...|.||....|:.:|:|.|...|.: |:|
Worm 45 QQSDSSSSVDESGSKTSSPTSMQQNPSQDGRKNRKKGTNLYGRPYCPGRPLSMEERTRIIQLHNN 109
Fly 323 GHNTNSGS-------GCGDSSAGSGRLS---LPALSPDSGSRDSRSPDADANRMIDIEGEDSESQ 377
|...|:.| ||........|.: |||.||: .|.|| .|...:|| |..:
Worm 110 GMKVNAISKSLCISHGCVSKIISRFRATGVLLPACSPE--QRKSR------KRKSSMEG--SAME 164
Fly 378 DSDQPKFRRNRTTFSPEQLDE 398
.|..|.|...:.....|.|:|
Worm 165 QSFIPVFVSMQDANGNEYLNE 185
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
toe | NP_524041.2 |
HTH |
134..230 |
CDD:304362 |
|
Homeobox |
388..440 |
CDD:278475 |
3/11 (27%) |
npax-3 | NP_502006.2 |
PAX |
78..200 |
CDD:128645 |
26/118 (22%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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