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Protein Alignment toe and npax-2
DIOPT Version :9
| Sequence 1: | NP_524041.2 |
Gene: | toe / 39418 |
FlyBaseID: | FBgn0036285 |
Length: | 640 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_508396.3 |
Gene: | npax-2 / 185967 |
WormBaseID: | WBGene00018591 |
Length: | 233 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 161 |
Identity: | 48/161 - (29%) |
| Similarity: | 73/161 - (45%) |
Gaps: | 13/161 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 78 TTVLAQPHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRF 142
|:....|.|||.|: |....||...........|.....|...:....| ::..:..:::|.:.
Worm 67 TSDSGSPSSLSCSS--LDYDVPPPPQYEKDVARSSGRNQLGRTYSPGLPL-SMCEREEIVKLFQG 128
Fly 143 GLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVA------TPTVVSKIEQYKRENPTIFA 201
|.:..|:::.:......|||:|...|..|.: |||.| :|.|:: :..|:........
Worm 129 GWKICDISKRLCVTHSCVSKILNRYRQTGSV---KPKDAKEGRTESPLVLA-VRDYRSRLGMCRQ 189
Fly 202 WEIRERLITEGVCTNATAPSVSSINRILRNR 232
.||||:||.:||||...|||.||||.|||.:
Worm 190 SEIREQLIRDGVCTRDNAPSRSSINHILRTK 220
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| toe | NP_524041.2 |
HTH |
134..230 |
CDD:304362 |
34/101 (34%) |
| Homeobox |
388..440 |
CDD:278475 |
|
| npax-2 | NP_508396.3 |
PAX |
97..218 |
CDD:128645 |
37/125 (30%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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