DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Pax7

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus


Alignment Length:589 Identity:166/589 - (28%)
Similarity:232/589 - (39%) Gaps:222/589 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLPGAAPAIPATATAGSQSPGAIMPMAAVPLPSHLQLLGSSAGGVGQPAAITPVSPTAATTVLAQ 83
            :||||.|.:.      ...||...|....|                                   
Mouse     3 ALPGAVPRMM------RPGPGQNYPRTGFP----------------------------------- 26

  Fly    84 PHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYD 148
               |..|||:   |......|||:|..|....            |.:  :|:::|::..|:|...
Mouse    27 ---LEVSTPL---GQGRVNQLGGVFINGRPLP------------NHI--RHKIVEMAHHGIRPCV 71

  Fly   149 LAQHMLSQQGAVSKLL------GTLRPPGLIGGSKPK-VATPTVVSKIEQYKRENPTIFAWEIRE 206
            :::.:....|.|||:|      |::| ||.||||||: ||||.|..|||:||||||.:|:||||:
Mouse    72 ISRQLRVSHGCVSKILCRYQETGSIR-PGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRD 135

  Fly   207 RLITEGVCTNATAPS--VSSINRILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHH 269
            ||:.:|.|..:|.||  ||||:|:||.:..::...|                             
Mouse   136 RLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEDDE----------------------------- 171

  Fly   270 PLWGAVPLATPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGD 334
                                       .|.....||...:                         
Mouse   172 ---------------------------EGDKKEEDGEKKA------------------------- 184

  Fly   335 SSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQP---KFRRNRTTFSPEQL 396
                  :.|:..:..|.|:|            :| ||.|.|| :.|.|   |.||:||||:.|||
Mouse   185 ------KHSIDGILGDKGNR------------LD-EGSDVES-EPDLPLKRKQRRSRTTFTAEQL 229

  Fly   397 DELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSP- 460
            :||||.|:::|||.:.|||:||.||.|:|||||||||||||:||:....|.:...:.......| 
Mouse   230 EELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPP 294

  Fly   461 --TPLVNPVVSPVSPIPVPVPVAVPESG----QQKQPYPYSTSNM---------CNTSSS----- 505
              .|.:.|...|.|..|.   ..:.:.|    .:.||.|.||.:.         .:|||:     
Mouse   295 TGMPTLPPYQLPDSTYPT---TTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARH 356

  Fly   506 --SSNSQ-------PCNTINPGSK-MSSKTSSVSSNQHMEEPAAAVATASPTASAPLSM----GG 556
              ||.|.       |.|.:||.|. :|.:..|:.||     |:|    ..|...|..|:    ||
Mouse   357 SFSSYSDSFMNPGAPSNHMNPVSNGLSPQVMSILSN-----PSA----VPPQPQADFSISPLHGG 412

  Fly   557 ENSA 560
            .:||
Mouse   413 LDSA 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 50/104 (48%)
Homeobox 388..440 CDD:278475 36/51 (71%)
Pax7XP_006538692.1 PAX 34..161 CDD:128645 57/141 (40%)
Homeobox 220..274 CDD:365835 37/53 (70%)
Pax7 347..385 CDD:372070 12/37 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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