DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and Pax5

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_032808.1 Gene:Pax5 / 18507 MGIID:97489 Length:391 Species:Mus musculus


Alignment Length:525 Identity:132/525 - (25%)
Similarity:193/525 - (36%) Gaps:175/525 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYDLAQHM 153
            |:...:..|......|||:|..|...  |...            :.|::||:..|:|..|:::.:
Mouse     8 PTPRTIRTGHGGVNQLGGVFVNGRPL--PDVV------------RQRIVELAHQGVRPCDISRQL 58

  Fly   154 LSQQGAVSKLLGTLR-----PPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGV 213
            ....|.|||:||...     .||:|||||||||||.||.||.:|||:|||:||||||:||:.|.|
Mouse    59 RVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERV 123

  Fly   214 CTNATAPSVSSINRILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLA 278
            |.|.|.|||||||||:|.:..:                                           
Mouse   124 CDNDTVPSVSSINRIIRTKVQQ------------------------------------------- 145

  Fly   279 TPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLS 343
             ||                           :.|..::|::..|.|..|...|...||:..|..: 
Mouse   146 -PP---------------------------NQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSI- 181

  Fly   344 LPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPK--------FRRNR---TTFSPEQLD 397
                   ||.....||.||.|:    ...|...|:|..|.        |.|.:   ..|:.:||:
Mouse   182 -------SGILGITSPSADTNK----RKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLE 235

  Fly   398 ELEKEFDKSHYPCVNTR------EKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPST 456
            .|::.|::.||..:.|.      |:....:|::..          |......:.||.....:...
Mouse   236 VLDRVFERQHYSDIFTTTEPIKPEQTTEYSAMASL----------AGGLDDMKANLTSPTPADIG 290

  Fly   457 SSSPTPLVNPVVS--PVSPIPVP-VPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPG 518
            ||.|.|...|:|:  .::...:| .|..||.:||.....|..|..:                 ||
Mouse   291 SSVPGPQSYPIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMV-----------------PG 338

  Fly   519 SKMSS------KTSSVSSNQHMEEPAAAVATASPTASAPLSMGGENSAFRALPMTLPMPMTLPTA 577
            |:.|.      :.||.:.:.....|.   ...||...:|.:.|                 ..|.|
Mouse   339 SEFSGSPYSHPQYSSYNDSWRFPNPG---LLGSPYYYSPAARG-----------------AAPPA 383

  Fly   578 SAAAF 582
            :|.|:
Mouse   384 AATAY 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 57/100 (57%)
Homeobox 388..440 CDD:278475 11/60 (18%)
Pax5NP_032808.1 PAX 16..140 CDD:128645 64/137 (47%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 18/69 (26%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 33/47 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 11/39 (28%)
Pax2_C 285..389 CDD:289189 29/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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