DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and npax-1

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_495533.2 Gene:npax-1 / 184779 WormBaseID:WBGene00017664 Length:176 Species:Caenorhabditis elegans


Alignment Length:182 Identity:39/182 - (21%)
Similarity:69/182 - (37%) Gaps:34/182 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 HLQLLGSSAGGVGQPAAITPVSPTAATTVLAQPHSLS----PSTPILTQGAPPAAALGGIFCGGS 112
            |.....|:.|..|.|...|...|....::|:..:|||    .::|.:.:| ....|:|..:    
 Worm     8 HTHFPVSTNGSTGSPPNNTLPPPIIPYSLLSAFYSLSSANISTSPEINEG-EKVKAVGRSY---- 67

  Fly   113 AAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSK 177
               .||...       .|..:.:::.|...|.|...:|:.:......|||::...|..|.:   :
 Worm    68 ---NPGRPL-------CLEDRKKIVRLYEEGCRVSHIARLIGVTHSCVSKIMSRYRRTGSV---Q 119

  Fly   178 PKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRIL 229
            |:....|     |..:.:|.|....:::::...|       .|...||.|||
 Worm   120 PRSFRAT-----ENQENDNATWQQQQLKQQQKKE-------KPLPFSIERIL 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 21/96 (22%)
Homeobox 388..440 CDD:278475
npax-1NP_495533.2 HTH 60..>122 CDD:389747 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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