DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and alr-1

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:362 Identity:91/362 - (25%)
Similarity:136/362 - (37%) Gaps:116/362 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 CTNATAPSVSSINRILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLA 278
            |.....|:.:.:|:..::...:..|..||              :|...||::|            
 Worm    20 CPPLHRPNGADLNQYSKSLMEQLQAQLFA--------------NPALQFPSFP------------ 58

  Fly   279 TPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDS--SAGSGR 341
                  ||.:..||                       :|..|....:....:..||:  .|.|..
 Worm    59 ------PAFSIAAL-----------------------TNNQHELKEDDGKKTPTGDNILEAASVL 94

  Fly   342 LSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKS 406
            .:....||..|   :.|||                 |:.:.|.||.|||||..|||||||.|.::
 Worm    95 DNRENGSPSDG---TNSPD-----------------DNGKRKQRRYRTTFSAFQLDELEKVFART 139

  Fly   407 HYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVVSPV 471
            |||.|.|||:||.|..|:||||||||.|||||:|:.:|         .||..             
 Worm   140 HYPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQER---------SSTHH------------- 182

  Fly   472 SPIPVPVPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHMEE 536
               |...|:::|.|....   ||..........::.|.|....:     ::.:....:|::..:.
 Worm   183 ---PYQAPMSIPNSNGDN---PYQMMLSQEAIFAAINQQAAAHL-----LNEQVRIATSDRRSQS 236

  Fly   537 PAAAVATAS---PTASAPLSMGGE--NSAFRAL-PMT 567
            |:..|.|:|   ||:..|.....:  |..|..: |:|
 Worm   237 PSVPVTTSSPILPTSVTPTFQNADALNMLFGGITPVT 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 3/15 (20%)
Homeobox 388..440 CDD:278475 37/51 (73%)
alr-1NP_509860.1 Homeobox 121..174 CDD:365835 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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