DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and RHOXF1

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_011529583.1 Gene:RHOXF1 / 158800 HGNCID:29993 Length:212 Species:Homo sapiens


Alignment Length:171 Identity:55/171 - (32%)
Similarity:75/171 - (43%) Gaps:36/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 TPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLS 343
            ||..|..:.|.|.:..|..|..    |||  ||   .....|.||.|.:.|              
Human    52 TPQLGAASSAEGHVGQGAPGLM----GNM--NP---EGGVNHENGMNRDGG-------------- 93

  Fly   344 LPALSPDSGS-----RDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEF 403
               :.|:.|.     |....|..:......:||...|:.   ||:.|  ||.|:..|::|||..|
Human    94 ---MIPEGGGGNQEPRQQPQPPPEEPAQAAMEGPQPENM---QPRTR--RTKFTLLQVEELESVF 150

  Fly   404 DKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQR 444
            ..:.||.|.||.:||....::|.:|:|||.|:||:.|||||
Human   151 RHTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCRRHQR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 23/51 (45%)
RHOXF1XP_011529583.1 homeodomain 132..190 CDD:238039 26/59 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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